Table 2. Summary of phenotypic effects obtained by RNAi of Trypanosoma brucei ER chaperone candidates.
Function | Number1 | Proliferation2 | Morphology2 | ER2 | Increase in VSG abundance2 |
Chaperone/HSP | 8 | 63 | 63 | 63 | 38 |
Calreticulin/redox | 11 | 80 | 80 | 80 | 72 |
Post-ER lectins | 2 | 50 | 50 | 50 | 50 |
GPI/sphingolipid | 1 | 0 | 0 | 0 | 0 |
Total | 22 | 68 | 68 | 68 | 55 |
Each ORF was subjected to suppression using RNA interference, and the effect on proliferation, cell morphology, ER morphology (ER) and the presence of increased VSG abundance monitored as described in methods and the text. ORFs are grouped in functional classes, using the same categories as in Table 1.
Total number of distinct ORFs analysed; number collapsed to one for multiple copies targeted by same construct.
Data for phenotype are expressed as percent of total number of ORFs tested.