Skip to main content
. 2010 Jan 5;5(1):e8468. doi: 10.1371/journal.pone.0008468

Table 3. Phenotypic classification of defects obtained following suppression of expression under RNAi.

Accession (geneDB) Annotation Proliferation1 Morphology2 Vesiculated ER Swollen ER Multinucleated Increase in level of
VSG ISG65 ISG75
11.02.5450/5500 BiP + + ++ ++
09.160.3090 Hsp70 (Imported to ER) + + + ++ + +
09.211.1390 Hsp70 (Imported to ER) + +
11.01.3110 Hsp70 (cytosolic) + + ++ ++
927.3.3580 GRP94/LPG3
927.3.1430 DNAj
11.01.8480 DNAj
09.211.3680 DNAj + + + + ++ ++ +/−
10.70.5440 DNAj + + + ++ +/− +/−
927.4.5010/927.8.7410 Calreticulin + + +/− ++ ++ + +/− +/−
10.05.0080 ER glucosidase II + + +/− ++ ++
927.8.2910/2920/2930/2940 EDEM A + + + ++ +
EDEM B + + +/− ++ +
927.3.4630 Glycoprotein glucosyltransferase + + +/− +/− ++
11.01.2470 Yos9
11.02.1680 ERGIC53
10.20.0130 Vip36 + + + + ++
927.7.13003 ERp72 +
10.6k15.2290 ERp57 + + + ++ ++ +/− +/−
927.8.4890 Ero1 + + +/− +
927.7.5790 ERp44 + + + ++ +
927.4.4740 Lag1/Dgt1
11.02.4100 Sec61 + + ++ ++ + + +

All experiments were conducted in bloodstream stages and analysis of cells performed after one and two days induction.

1

Proliferation score: +; greater than 20% proliferation defect observed on at least two consecutive days.

2

Morphological and protein expression changes are scored as follows: ++; strong (expression level at least twice control, abnormal morphology in more than 50% of cells and severe), +; moderate (expression level up to twice control, morphology in up to 50% of cells and obvious), +/−; mild (expression level changes less than twice control, morphology in fewer than 50% of cells and not pronounced), and −; no detectable change. Blank; no data.

3

Tb927.7.1300 (ERp72) – this cell line has not been analysed by IFA or Western as positive clones could not be expanded.