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. 2009 Dec 8;10:588. doi: 10.1186/1471-2164-10-588

Table 2.

Variance among three replicate HapMap-HapMap comparisons

Platform 1st Quart Median Mean 3rd Quart
Affymetrix 0.067 0.173 0.356 0.391
Agilent 0.046 0.122 0.304 0.284
Illumina 0.058 0.151 0.372 0.352
Nimblegen 1.21 3.03 5.65 6.47

After calculating the variance of each feature from three suitable scaled HapMap/HapMap comparisons, the mean, and quartile values of the variances are presented.