Table 2.
Methylation Profile of Eight Genes in Normal PBMC, HTLV- I Carrier, and Various Types of ATLL
| Normal PBMC (n = 16) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Age | Sex | SHP1 | p15 | p16 | p73 | hMLH1 | MGMT | DAPK | HCAD | CIMP |
| 49 | M | |||||||||
| 46 | M | |||||||||
| 31 | M | |||||||||
| 29 | F | |||||||||
| 26 | F | + | ||||||||
| 29 | F | + | + | |||||||
| 27 | F | |||||||||
| 54 | M | + | ||||||||
| 43 | M | + | ||||||||
| 30 | F | |||||||||
| 29 | F | + | ||||||||
| 52 | M | + | ||||||||
| 43 | M | |||||||||
| 56 | F | |||||||||
| 57 | F | + | ||||||||
| 40 | M | + | ||||||||
| % methylation | 0% | 19% | 0% | 0% | 0% | 0% | 0% | 38% | 0% | |
| (0/16) | (3/16) | (0/16) | (0/16) | (0/16) | (0/16) | (0/16) | (6/16) | (0/16) | ||
| HTLV-1 carrier (n = 10) | ||||||||||
| 50 | F | |||||||||
| 52 | F | + | ||||||||
| 38 | M | + | ||||||||
| 49 | M | + | ||||||||
| 57 | M | + | ||||||||
| 42 | M | + | ||||||||
| 72 | F | + | ||||||||
| 34 | F | + | + | + | + | |||||
| 36 | M | + | + | + | + | |||||
| 52 | F | + | + | + | + | + | ||||
| % methylation | 30% | 20% | 0% | 30% | 10% | 20% | 20% | 30% | 30% | |
| (3/10) | (2/10) | (0/10) | (3/10) | (1/10) | (2/10) | (2/10) | (3/10) | (3/10) | ||
| Smoldering type (n = 15) | ||||||||||
| 66 | M | + | ||||||||
| 56 | F | + | ||||||||
| 62 | F | + | ||||||||
| 53 | M | + | ||||||||
| 48 | F | + | + | |||||||
| 43 | F | + | + | |||||||
| 63 | M | + | + | |||||||
| 54 | M | + | + | |||||||
| 48 | F | + | + | |||||||
| 51 | F | + | + | |||||||
| 58 | M | + | + | + | + | |||||
| 55 | F | + | + | + | + | |||||
| 79 | M | + | + | + | + | |||||
| 49 | F | + | + | + | + | |||||
| 71 | M | + | + | + | + | + | + | |||
| % methylation | 20% | 27% | 13% | 7% | 0% | 7% | 47% | 100% | 33% | |
| (3/15) | (4/15) | (2/15) | (1/15) | (0/15) | (1/15) | (7/15) | (15/15) | (5/15) | ||
| Chronic type (n = 5) | ||||||||||
| 64 | M | + | ||||||||
| 68 | M | + | + | + | + | |||||
| 34 | F | + | + | + | + | + | ||||
| 47 | M | + | + | + | + | + | ||||
| 59 | F | + | + | + | + | + | ||||
| % methylation | 60% | 40% | 0% | 40% | 0% | 40% | 60% | 100% | 80% | |
| (3/5) | (2/5) | (0/5) | (1/5) | (0/5) | (2/5) | (3/5) | (5/5) | (4/5) | ||
| Acute type (n = 15) | ||||||||||
| 60 | F | |||||||||
| 64 | M | + | + | |||||||
| 60 | M | + | ||||||||
| 58 | M | + | + | |||||||
| 73 | M | + | + | |||||||
| 45 | F | + | + | |||||||
| 65 | F | + | + | |||||||
| 47 | F | + | + | + | + | |||||
| 67 | F | + | + | + | + | |||||
| 67 | F | + | + | + | + | |||||
| 53 | F | + | + | + | + | |||||
| 53 | F | + | + | + | + | |||||
| 55 | F | + | + | + | + | + | ||||
| 72 | M | + | + | + | + | + | ||||
| 73 | M | + | + | + | + | + | + | |||
| % methylation | 80% | 20% | 0% | 0% | 20% | 0% | 53% | 87% | 53% | |
| (12/15) | (3/15) | (0/15) | (0/15) | (3/15) | (0/15) | (8/15) | (13/15) | (8/15) | ||
| Lymphoma type (n = 20) | ||||||||||
| 47 | M | + | ||||||||
| 70 | M | + | + | |||||||
| 47 | M | + | + | + | + | |||||
| 74 | M | + | + | + | + | |||||
| 70 | M | + | + | + | + | |||||
| 59 | F | + | + | + | + | |||||
| 41 | M | + | + | + | + | |||||
| 64 | F | + | + | + | + | |||||
| 77 | M | + | + | + | + | |||||
| 57 | M | + | + | + | + | + | ||||
| 36 | F | + | + | + | + | + | ||||
| 74 | M | + | + | + | + | + | ||||
| 47 | M | + | + | + | + | + | ||||
| 67 | M | + | + | + | + | + | ||||
| 69 | M | + | + | + | + | + | + | |||
| 82 | F | + | + | + | + | + | + | |||
| 48 | F | + | + | + | + | + | + | |||
| 67 | F | + | + | + | + | + | + | + | ||
| 58 | M | + | + | + | + | + | + | + | ||
| 75 | M | + | + | + | + | + | + | + | ||
| % methylation | 90% | 20% | 40% | 15% | 5% | 45% | 80% | 90% | 90% | |
| (18/20) | (4/20) | (8/20) | (3/20) | (1/20) | (9/20) | (16/20) | (18/20) | (18/20) | ||
| Total % methylation | SHP1 | p15 | p16 | p73 | hMLH1 | MGMT | DAPK | HCAD | CIMP | |
| 60% | 23% | 15% | 12% | 8% | 22% | 55% | 63% | 58% | ||
| (39/65) | (15/65) | (10/65) | (8/65) | (5/65) | (14/65) | (36/65) | (41/65) | (38/65) | ||
The methylation profile, showing the + represents methylated specimens, while the blank columns represent unmethylated specimens. M, male; F, female.