Table 1.
Metal-transport and metaboli-associated genes of selected Helicobacter species
Gene | H. pyloria | H. hepaticusb | H. mustelae | Proposed function |
---|---|---|---|---|
fecA1 | 0686 | – | Present | Outer membrane receptor |
fecA2 | 0807 | – | – | Outer membrane receptor |
fecA3 | 1400 | – | – | Outer membrane receptor |
frpB1 | 0876 | 1847 | Present | Outer membrane receptor |
frpB2 | 0916/0915 | – | Present | Outer membrane receptor |
frpB3c | 1512 | – | – | Outer membrane receptor |
cfrA | – | 0721 | Present | Outer membrane receptor |
hh0418 | – | 0418 | 3 copies | Outer membrane receptor |
fecD | 0889 | ? | Present | Inner membrane permease |
fecE | 0888 | 1759 | Present | ATPase |
ceuE1 | 1562 | ? | Present | Periplasmic binding protein |
ceuE2 | 1561 | – | – | Periplasmic binding protein |
feoB | 0687 | 0033 | Present | Ferrous iron transporter |
pfr | 0653 | 1334 | Present | Ferritin |
dpsd | 0243 | 0210 | Present | Bacterioferritin/Dps ortholog |
nixA | 1077 | – | Present | Inner membrane nickel transporter |
nikABDE | – | 0417–0414 | – | Inner membrane nickel ABC transporter |
cadA | 0791 | 0586 | Present | P-type ATPase |
copA | 1072 | 0682 | Present | P-type ATPase |
copA2 | 1502 | 1022 | – | P-type ATPase |
cznABC | 0969–0971 | 0625–0623 | Present | Cobalt-zinc-nickel resistance determinant |
crdAB | 1326–1327 | – | – | Copper resistance determinant |
fur | 1027 | 0893 | Present | Ferric uptake regulator |
perR | – | 0942 | Present | Peroxide stress regulator |
nikR | 1338 | 0352 | Present | Nickel-responsive regulator |
crdRS | 1365/1364 | 1656–1657 | ? | Two-component copper-regulatory system |
a Gene numbers from the genome sequence of H. pylori strain 26695 (Tomb et al. 1997)
b Gene numbers from the genome sequence of H. hepaticus strain ATCC51449 (Suerbaum et al. 2003)
c Alternative designation frpB4
d The H. pylori Dps protein is also known as Neutrophil Activating Protein (HP-NAP)