TABLE 1.
Primer | Sequence (5′ → 3′) | Target region in D39 pneumococcal genome (reference)d |
---|---|---|
SPD0065F | CTGCTAAACTGCCCAGAGATG | 65426-67226 |
SPD0065R | GGATACGCAACGTAAGGGAA | |
SPD0562F | CATGGCAAGGTTGAAACTCA | 580628-582435 |
SPD0562R | GCCGTGAACGCTATAAGGCGC | |
SPD0065CF | GCGAGATCTTGATGACACGATTTGAGATACGAGAT | NAa |
SPD0065CF | GCGAGATCTTGTCATAAGTTTTCCCCCTTTATATGTT | |
MALF | GCTTGAAAAGGAGTATACTT | NAb |
PCEPR | AGGAGACATTCCTTCCGTATC | |
MP127 | CCGGGGACTTATCAGCCAACC | pR410 and pR412 (32) |
MP128 | TACTAGCGACGCCATCTATGTG | |
SPD0709F | TCGTGTGGCTGCCAAGCGTG | 724517-724650 |
SPD0709R | GGCTGATCCACCAGCTGAGTC | |
SPD0065RTF | GGACCTCTTTGTAACAGGAA | 66449-66608 |
SPD0065RTR | CATCTGCCAATTCCTTAGGA | |
SPD0562RTF | CCTTAGAGCTAAGCATCCAA | 581545-581721 |
SPD0562RTR | GTTGCTGTTTTCCCCCAA | |
SPD0065IFF | TAAGGCCTCTGTCGACACACGATTTGAGATACGAGAc | 65847-67631 |
SPD0065IFR | CAGAATTCGCAAGCTTTCATAAGTTTTCCCCCTTTA |