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. 2010 Jan 22;6(1):e1000648. doi: 10.1371/journal.pcbi.1000648

Table 1. Selected predicted secondary targets of compound 1 in humans.

Protein AD Score SOIPPA p-value Sequence Identity FATCAT p-value
Metabolism UDP-glucose 4-epimerase (1I3L:B) −11.22 3% 0.613
NAGK (2CH5:C) −10.75 3.45×10−2 9% 0.351
acetyl-CoA carboxylase 2 (2HJW:A) −10.28 7.82×10−3 5% 0.423
mitochondrial 2-enoyl thioester reductase (1ZSY:A) −10.04 <1×10−5 4% 0.754
tubby isoform A (1S31:A) −9.17 6% 0.615
DNA synthesis, repair, replication DNA ligase I (1X9N:A, residues 535–751) −9.70 <1×10−5 5% 3.82×10−3
3-methyl-adenine DNA glycosylase (1EWN:A) −9.09 1.18×10−2 10% 0.800
thymidylate synthase (1I00:A) −8.50 3% 0.237
Amino acid synthesis pyrroline-5-carboxylate reductase 1 (2GR9:B) −10.49 4.28×10−2 1% 0.702
Blood clotting fibrinogen (1FZE:B) −9.53 4% 0.626
Vision tubby related 1 (2FIM:B) −10.21 2.60×10−2 3% 0.637
Nuclear transport snurportin-1 (1XK5:A) −10.10 <1×10−5 4% 6.07×10−4

Human secondary targets are involved in metabolism; polynucleotide synthesis, repair, and replication; amino acid synthesis; blood clotting; vision; and nuclear transport. “AD score” refers to the AutoDock-predicted energy of binding to 1; “SOIPPA p-value” refers to the similarity between the secondary-target and TbREL1 active sites; “sequence identity” refers to the percent amino-acid identity with TbREL1 as computed by the CLUSTALW2 algorithm; and “FATCAT p-value” refers to the structural similarity between the secondary target and TbREL1. Protein sequences were extracted from PDB seqres headers.