Table 1.
Locus | GenBank Acc. or reference |
OMY | Posit. Kos cM1 | Number Alleles | PIC2 | Hetero- zygosity | Allelic Diversity | χ2 | DF | Pr > χ2 | Exact P3 |
---|---|---|---|---|---|---|---|---|---|---|---|
OMM3006 | G73806 | 13 | 39.9 | 13 | 0.844 | 0.802 | 0.858 | 127.6 | 78 | 0.0003 | 0.0615 |
OMM5092 | CA348764 | 13 | 39.9 | 5 | 0.705 | 0.708 | 0.746 | 20.7 | 10 | 0.0231 | 0.0152 |
OMY27DU | [4] | 13 | 44.6 | 5 | 0.575 | 0.594 | 0.618 | 5.7 | 10 | 0.8402 | 0.7166 |
OMM1670 | BV212162 | 13 | 44.6 | 16 | 0.889 | 0.844 | 0.898 | 242.4 | 120 | <.0001 | 0.0072 |
CA341677 | CA341677 | 13 | 44.6 | 6 | 0.544 | 0.604 | 0.590 | 99.5 | 15 | <.0001 | 0.2147 |
OMM1687 | BV212173 | 13 | 45.7 | 3 | 0.390 | 0.417 | 0.501 | 7.2 | 3 | 0.0659 | 0.0325 |
Oneu8 | U56708 | 14 | 22.2 | 6 | 0.596 | 0.583 | 0.654 | 5.8 | 15 | 0.9824 | 0.8181 |
OMM1312 | G73552 | 14 | 49.2 | 16 | 0.882 | 0.885 | 0.891 | 125.5 | 120 | 0.3477 | 0.1418 |
OMYRGT2TUF | AB087587 | 14 | 50.7 | 9 | 0.724 | 0.750 | 0.748 | 34.9 | 36 | 0.5218 | 0.6786 |
OMM1596 | BV212112 | 14 | 53.9 | 13 | 0.857 | 0.844 | 0.871 | 98.9 | 78 | 0.0552 | 0.0068 |
OMM5271 | BV211986 | 14 | 58.3 | 11 | 0.806 | 0.802 | 0.827 | 53.6 | 55 | 0.5286 | 0.4101 |
OmyRGT41TUF | [4] | 14 | 58.3 | 16 | 0.876 | 0.854 | 0.885 | 114.9 | 120 | 0.6136 | 0.3824 |
Ogo1UW | AF007827 | 14 | 58.3 | 5 | 0.620 | 0.635 | 0.679 | 98.9 | 10 | <.0001 | 0.1218 |
OMM3089 | BV718454 | 14 | 62.5 | 4 | 0.612 | 0.760 | 0.679 | 6.1 | 6 | 0.4098 | 0.3408 |
OMM1447 | BV079591 | 14 | 63.4 | 22 | 0.936 | 0.823 | 0.940 | 237.6 | 231 | 0.3696 | 0.0017 |
OMM3115 | AB162343 | 14 | 63.4 | 12 | 0.843 | 0.490 | 0.859 | 219.2 | 66 | <.0001 | <.0001 |
BHMS429 | AF256719 | 14 | 64.3 | 12 | 0.890 | 0.885 | 0.898 | 50.5 | 66 | 0.9214 | 0.9010 |
OMYFGT5TUF | [4] | 14 | 64.3 | 10 | 0.569 | 0.604 | 0.620 | 40.8 | 45 | 0.6515 | 0.3260 |
BHMS185 | AF256675 | 14 | 72.9 | 3 | 0.454 | 0.583 | 0.546 | 2.8 | 3 | 0.4239 | 0.2933 |
OMM1415 | BV722101 | 14 | 75.0 | 11 | 0.793 | 0.719 | 0.811 | 76.0 | 55 | 0.0317 | 0.0233 |
OMM1356 | BV005148 | 14 | 79.1 | 4 | 0.385 | 0.281 | 0.432 | 138.6 | 6 | <.0001 | <.0001 |
CR374305 | CR374305 | 14 | 81.2 | 13 | 0.790 | 0.646 | 0.809 | 439.9 | 78 | <.0001 | <.0001 |
OMM1467 | BV079662 | 14 | 82.7 | 12 | 0.866 | 0.906 | 0.878 | 79.2 | 66 | 0.1271 | 0.1546 |
OMM1643 | BV212150 | 14 | 86.5 | 11 | 0.764 | 0.750 | 0.785 | 89.7 | 55 | 0.0022 | 0.0354 |
OMM5143 | BV211872 | 14 | 106.2 | 11 | 0.828 | 0.427 | 0.846 | 271.4 | 55 | <.0001 | <.0001 |
OMM3044 | BV722031 | 14 | 130.0 | 8 | 0.739 | 0.396 | 0.775 | 242.4 | 28 | <.0001 | <.0001 |
OMM1712 | BV212193 | 17 | 81.7 | 13 | 0.855 | 0.823 | 0.868 | 67.9 | 78 | 0.7859 | 0.5445 |
CA367675 | CA367675 | 17 | 84.8 | 12 | 0.851 | 0.917 | 0.864 | 51.7 | 66 | 0.9017 | 0.8540 |
OMM5043 | CA349167 | 17 | 89.5 | 8 | 0.795 | 0.750 | 0.820 | 34.5 | 28 | 0.1836 | 0.1205 |
OMM3126 | BV683039 | 17 | 90.3 | 18 | 0.904 | 0.833 | 0.911 | 144.1 | 153 | 0.6841 | 0.1027 |
OMM1437 | BV722116 | 17 | 91.3 | 15 | 0.897 | 0.865 | 0.904 | 105.6 | 105 | 0.4648 | 0.1512 |
OMM1357 | BV005149 | 17 | 105.4 | 17 | 0.867 | 0.833 | 0.877 | 207.1 | 136 | <.0001 | 0.0305 |
OMM5227 | BX301679 | 17 | 107.8 | 7 | 0.697 | 0.510 | 0.738 | 91.2 | 21 | <.0001 | <.0001 |
CA041953 | CA041953 | 17 | 136.3 | 3 | 0.420 | 0.458 | 0.476 | 2.0 | 3 | 0.5711 | 0.4895 |
OMM1026 | AF346683 | sex | 0.0 | 15 | 0.880 | 0.896 | 0.890 | 123.9 | 105 | 0.1007 | 0.5136 |
OMM1461 | BV079604 | sex | 17.7 | 5 | 0.637 | 0.625 | 0.683 | 5.1 | 10 | 0.8870 | 0.7533 |
OMYRGT28TUF | AB087599 | sex | 21.1 | 15 | 0.830 | 0.760 | 0.846 | 172.6 | 105 | <.0001 | 0.1674 |
OMM1000 | AF346664 | sex | 21.1 | 3 | 0.385 | 0.417 | 0.425 | 0.5 | 3 | 0.9170 | 0.9396 |
OMM5031 | CA349143 | sex | 29.7 | 9 | 0.722 | 0.865 | 0.753 | 59.8 | 36 | 0.0076 | 0.0005 |
OMM5032 | CA349143 | sex | 29.7 | 11 | 0.842 | 0.844 | 0.857 | 94.7 | 55 | 0.0007 | 0.0895 |
BX076085 | BX076085 | sex | 35.6 | 12 | 0.868 | 0.646 | 0.879 | 156.8 | 66 | <.0001 | <.0001 |
OMM1372 | BV005159 | sex | 36.0 | 6 | 0.560 | 0.323 | 0.604 | 98.1 | 15 | <.0001 | <.0001 |
OMM1212 | BV722077 | sex | 44.3 | 11 | 0.794 | 0.781 | 0.813 | 61.9 | 55 | 0.2421 | 0.2160 |
OMM1443 | BV079588 | sex | 44.3 | 13 | 0.873 | 0.896 | 0.884 | 94.5 | 78 | 0.0984 | 0.0511 |
OMM3109 | BV718471 | sex | 46.2 | 13 | 0.754 | 0.677 | 0.771 | 101.8 | 78 | 0.0363 | 0.0754 |
OMM1456 | BV079600 | sex | 46.9 | 7 | 0.691 | 0.729 | 0.736 | 14.6 | 21 | 0.8447 | 0.7070 |
OMM1118 | AF375026 | sex | 47.7 | 24 | 0.921 | 0.948 | 0.925 | 314.2 | 276 | 0.0564 | 0.1749 |
OMM1405 | BV722096 | sex | 51.3 | 11 | 0.817 | 0.594 | 0.835 | 141.1 | 55 | <.0001 | <.0001 |
OMM1665 | BV212292 | sex | 58.5 | 17 | 0.881 | 0.656 | 0.890 | 325.0 | 136 | <.0001 | <.0001 |