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. 2009 Oct 15;11(1):164–175. doi: 10.1093/biostatistics/kxp045

Table 1.

Genotype classes by copy number states. A description of possible genotypes for the first few minor and major copy numbers

Total copy number (h) Number of genotype classes Number of minor alleles (g) 0 (LOH) 1 2
0 1 DEL
1 1 {A,B}
2 2 {AA,BB} {AA,AB,BB}
3 2 {AAA,BBB} {AAA,AAB,ABB,BBB}
4 3 {AAAA,BBBB} {AAAA,AAAB,ABBB,BBBB} {AAAA,AABB,BBBB}
5 3 {AAAAA,BBBBB} {AAAAA,AAAAB, ABBBB,BBBBB} {AAAAA,AAABB, AABBB,BBBBB}