Table 1.
Partial list of HuD targets
| Probe set ID | Fold enrichment | Gene symbol | Description | Ensembl |
|---|---|---|---|---|
| 1438554_x_at | 19.43 | Eif4h | Eukaryotic translation initiation factor 4H | ENSMUSG00000040731 |
| 1452833_at | 19.42 | Rapgef2 | Rap guanine nucleotide exchange factor (GEF) 2 | ENSMUSG00000062232 |
| 1424358_at | 19.16 | Ube2e2 | Ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) | ENSMUSG00000058317 |
| 1434277_a_at | 19.08 | Ypel2 | Yippee-like 2 (Drosophila) | ENSMUSG00000018427 |
| 1416313_at | 18.85 | Mllt11 | Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 | ENSMUSG00000053192 |
| 1434310_at | 18.78 | Bmpr2 | Bone morphogenic protein receptor, type II (serine/threonine kinase) | – |
| 1429839_a_at | 18.63 | Yaf2 | YY1 associated factor 2 | ENSMUSG00000022634 |
| 1435521_at | 18.5 | Msi2 | Musashi homolog 2 (Drosophila) | ENSMUSG00000069769 |
| 1457248_x_at | 18.47 | Hsd17b7 | Hydroxysteroid (17-beta) dehydrogenase 7 | ENSMUSG00000026675 |
| 1435807_at | 18.46 | Cdc42 | Cell division cycle 42 homolog (S. cerevisiae) | ENSMUSG00000006699 |
| 1416767_a_at | 18.45 | RIKEN cDNA 1110003E01 gene | ENSMUSG00000037822 | |
| 1433519_at | 18.43 | Nucks1 | Nuclear casein kinase and cyclin-dependent kinase substrate 1 | – |
| 1450021_at | 18.38 | Ubqln2 | Ubiquilin 2 | ENSMUSG00000050148 |
| 1437457_a_at | 18.38 | Mtpn | Myotrophin | ENSMUSG00000029840 |
| 1416082_at | 18.32 | Rab1 | RAB1, member RAS oncogene family | ENSMUSG00000020149 |
| 1448100_at | 18.31 | RIKEN cDNA 4833439L19 gene | ENSMUSG00000025871 | |
| 1447776_x_at | 18.29 | Rab6 | RAB6, member RAS oncogene family | ENSMUSG00000030704 |
| 1432198_at | 18.29 | RIKEN cDNA A230083H22 gene | ENSMUSG00000039126 | |
| 1448504_a_at | 18.28 | Cbx3 | Chromobox homolog 3 (Drosophila HP1 gamma) | ENSMUSG00000029836 ENSMUSG00000059647 |
| 1415971_at | 18.23 | Marcks | Myristoylated alanine rich protein kinase C substrate | ENSMUSG00000069662 |
| 1426776_at | 18.21 | Wasl | Wiskott–Aldrich syndrome-like (human) | ENSMUSG00000029684 |
| 1433540_x_at | 18.16 | Ppp1cb | Protein phosphatase 1, catalytic subunit, beta isoform | ENSMUSG00000014956 |
| 1426401_at | 18.15 | Ppp3ca | Protein phosphatase 3, catalytic subunit, alpha isoform | ENSMUSG00000028161 |
| 1419112_at | 18.12 | Nlk | Nemo like kinase | ENSMUSG00000017376 |
| 1423895_a_at | 18.11 | Cugbp2 | CUG triplet repeat, RNA-binding protein 2 | ENSMUSG00000002107 |
| 1423220_at | 18.07 | Eif4e | Eukaryotic translation initiation factor 4E | ENSMUSG00000028156 |
| 1458351_s_at | 18.06 | Klhl2 | Kelch-like 2, Mayven (Drosophila) | ENSMUSG00000031605 |
| 1440270_at | 18.05 | Fgf12 | Fibroblast growth factor 12 | ENSMUSG00000022523 |
| 1434082_at | 18.04 | Pctk2 | Serine/threonine-protein kinase PCTAIRE-2 | ENSMUSG00000020015 |
| 1434232_a_at | 18.04 | RIKEN cDNA 2610030H06 gene | ENSMUSG00000073131 | |
| 1428473_at | 18.03 | Ppp3cb | Protein phosphatase 3, catalytic subunit, beta isoform | ENSMUSG00000021816 |
| 1448184_at | 18.03 | Fkbp1a | FK506-binding protein 1a | ENSMUSG00000032966 |
| 1447669_s_at | 18.02 | Gng4 | Guanine nucleotide binding protein (G protein), gamma 4 subunit | ENSMUSG00000021303 |
| 1428970_at | 18.01 | Nat13 | N-acetyltransferase 13 | ENSMUSG00000022698 |
| 1437585_x_at | 17.99 | Zfp161 | Zinc finger protein 161 | ENSMUSG00000049672 |
| 1419246_s_at | 17.99 | Rab14 | RAB14, member RAS oncogene family | ENSMUSG00000026878 |
| 1438007_at | 17.94 | Expressed sequence AI851790 | ENSMUSG00000044071 | |
| 1424852_at | 17.87 | Mef2c | Myocyte enhancer factor 2C | – |
| 1436452_x_at | 17.82 | Tmed2 | Transmembrane emp24 domain trafficking protein 2 | ENSMUSG00000029390 ENSMUSG00000074460 |
| 1428416_at | 17.79 | RIKEN cDNA 3110050N22 gene | ENSMUSG00000043542 | |
| 1417377_at | 17.78 | Cadm1 | Cell adhesion molecule 1 | ENSMUSG00000032076 |
| 1433521_at | 17.75 | Ankrd13c | Ankyrin repeat domain 13c | ENSMUSG00000039988 |
| 1433751_at | 17.73 | Slc39a10 | Solute carrier family 39 (zinc transporter), member 10 | ENSMUSG00000025986 |
| 1424215_at | 17.72 | Fundc1 | FUN14 domain containing 1 | ENSMUSG00000025040 |
| 1434620_s_at | 17.72 | RIKEN cDNA 2610024E20 gene | ENSMUSG00000036501 | |
| 1421323_a_at | 17.71 | G3bp2 | GTPase activating protein (SH3 domain) binding protein 2 | ENSMUSG00000029405 |
| 1423309_at | 17.7 | Tgoln1 | Trans-golgi network protein | ENSMUSG00000056429 |
| 1426864_a_at | 17.7 | Ncam1 | Neural cell adhesion molecule 1 | ENSMUSG00000039542 |
| 1424683_at | 17.67 | RIKEN cDNA 1810015C04 gene | ENSMUSG00000022270 | |
| 1418067_at | 17.65 | Cfl2 | Cofilin 2, muscle | ENSMUSG00000062929 |
| 1437801_at | 17.62 | Morf4l1 | Mortality factor 4 like 1 | ENSMUSG00000062270 |
| 1428537_at | 17.62 | Csnk1a1 | Casein kinase 1, alpha 1 | ENSMUSG00000024576 |
| 1419971_s_at | 17.61 | Slc35a5 | Solute carrier family 35, member A5 | ENSMUSG00000022664 |
| 1417410_s_at | 17.61 | Prkci | Protein kinase C, iota | ENSMUSG00000037643 |
| 1417411_at | 17.61 | Nap1l5 | Nucleosome assembly protein 1-like 5 | ENSMUSG00000029804 |
| 1418436_at | 17.6 | Stx7 | Syntaxin 7 | ENSMUSG00000019998 |
| 1422748_at | 17.58 | Zeb2 | Zinc finger E-box binding homeobox 2 | ENSMUSG00000026872 |
| 1434820_s_at | 17.57 | Pkig | Protein kinase inhibitor, gamma | ENSMUSG00000035268 |
| 1415911_at | 17.57 | Impact | Imprinted and ancient | ENSMUSG00000024423 |
| 1454976_at | 17.55 | Sod2 | Superoxide dismutase 2, mitochondrial | ENSMUSG00000006818 |
| 1433986_at | 17.52 | cDNA sequence BC024659 | – | |
| 1437016_x_at | 17.46 | Rap2c | RAP2C, member of RAS oncogene family | ENSMUSG00000050029 |
| 1434106_at | 17.46 | Epm2aip1 | EPM2A (laforin) interacting protein 1 | ENSMUSG00000046785 |
| 1416008_at | 17.45 | Satb1 | Special AT-rich sequence binding protein 1 | ENSMUSG00000023927 |
| 1456177_x_at | 17.44 | Zfp706 | Zinc finger protein 706 | ENSMUSG00000062397 |
| 1416501_at | 17.44 | Pdpk1 | 3-phosphoinositide dependent protein kinase-1 | ENSMUSG00000024122 |
| 1423684_at | 17.44 | Hnrpk | Heterogeneous nuclear ribonucleoprotein K | ENSMUSG00000021546 |
| 1426924_at | 17.4 | Rc3h2 | Ring finger and CCCH-type zinc finger domains 2 | ENSMUSG00000075376 |
| 1437288_at | 17.38 | Impad1 | Inositol monophosphatase domain containing 1 | ENSMUSG00000066324 |
| 1429579_at | 17.37 | RIKEN cDNA 6330407I18 gene | – |
The top 70 most enriched mRNAs of the 700 putative HuD targets. The complete dataset is shown in Supplementary Table S1.