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. 2009 Oct 25;38(1):327–338. doi: 10.1093/nar/gkp898

Table 2.

PCR primers used for preparing dsDNAs used in Figures 5–7

Gene Upstream primer (5′-3′) Downstream primer (5′-3′) dsDNA (bp)a Ref.
AAVS1 GGTAGACAGGGCTGGGGTG CTCTCCTGCCCCTTCCTACA 62 + 30 + 73 (58)
ASS1 AGGTGGCTGTGAACGCTGA GACCGGGGACACGTGGC 32 + 21 + 36 (58)
BCL2 GGGGCCACGGAGAGCG GTCGGGCTGTGCAGAGAATG 62 + 23 + 50 (59)
C-KIT GGCATTAACACGTCGAAAGA TCCCTCTGCGCGCCGGC 56 + 20 + 34 (60)
C-MYC TGGGCGGAGATTAGCGAGAG CCTAGAGCTAGAGTGCTCGGC 80 + 30 + 39 (61)
CSTB GGCTTCGGAGTCCCCTGC CCAGCCTGCGGCGAGTG 51 + 21 + 40 (62)
EPO TCTGCATGTGTGCGTGCG CCGGCGAGCCTCAACC 51 + 30 + 39 (58)
GUK1 GGCGGGTCGTGATGTTAG ACCGCAGGGGCGTTCA 62 + 22 + 24 (13)
hTEL GGCTTCGGAGTCCCCTGC CCAGCCTGCGGCGAGTG 39 + 21 + 36
ITGB1 CGCGGCAGCACTTAAAGC CCTCCTGGACTAGCCTGGAAT 62 + 23 + 51 (58)
KRAS AGCTATCGATGCGTTCCG GAGCACTCCTTCTCCCCG 62 + 27 + 35 (63)
LRE2 GAGATCACATGGACACAGGAAGGG CTGCACCCACTAATGTGTCATCTA 50 + 23 + 49 (58)
NRAS GGCGAAAGAATGGAAGCG GGCCTCCGAACCACGAGT 83 + 18 + 34 (64)
PSMA4 ACCGCTCACCGAATAACCG CGAGGGGCACGGGTTCTA 55 + 22 + 57 (13)
UTX TTAAGTGGAGCCACGGCTGAC CTGAGGGGATTCGTTGGAGAC 78 + 16 + 93 (13)

aThe three numbers indicate, from left to right, the size of the duplex flanking the core G-rich sequence at the 5′ side, the core G-rich sequence and the duplex flanking the core G-rich sequence at the 3′ side, respectively.