Table 2.
Region |
|||
---|---|---|---|
I | II | III | |
Positiona | 104,421,433–104,425,062 | 104,633,434–104,635,208 | 104,641,039–104,642,851 |
Length (bp) | 3630 | 1776 | 1815 |
FSTb | 0.674 | 0.809 | 0.679 |
Segregating sitesc | |||
All | 21 (4) | 13 (4) | 11 (4) |
African | 16 | 7 | 10 |
Non-African | 11 | 7 | 1 |
θ per site × 10−3 | |||
All | 1.03 | 1.31 | 1.08 |
African | 1.03 | 0.92 | 1.29 |
Non-African | 0.57 | 0.75 | 0.1 |
π per site × 10−3 | |||
All | 0.66 | 0.81 | 0.75 |
African | 0.71 | 0.96 | 1.52 |
Non-African | 0.25 | 0.07 | 0.01 |
Tajima's D | |||
All | −0.996 | −0.976 | −0.765 |
African | −0.992 | 0.102 | 0.538 |
Non-African | −1.469 | −2.086∗ | −1.015 |
Fay and Wu's H | |||
All | 0.084 | −7.285∗ | −0.147 |
African | −0.738 | −1.105 | 0.322 |
Non-African | −2.563 | −7.804∗ | 0.018 |
Statistical significance: ∗ indicates p < 0.05 determined from 104 coalescent simulations.
Positions are from the March 2006 assembly of the UCSC genome browser (NCBI Build 36.1).
Window-based estimate of the two-population FST statistic between African and non-African populations.
The number in parentheses is the number of segregating sites where the common allele (i.e., the allele having a frequency greater than 0.5) is different in the African samples versus the non-African samples.