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. 2009 Jul-Sep;3(3):146–150. doi: 10.4161/pri.3.3.9339

Table 1.

Nucleotide sequence and characteristics of the primers used for PRNP genotyping

Primer Positions Orientation Nucleotide sequence 5′-3′ Genotype Tm (°C) G + C (%) Length (bp)
1 25819–25834 Forward GGCCTTGGCGGCTACA M129 57.8 69 16
2 25820–25834 Forward GCCTTGGCGGCTACG V129 55.8 73 15
3 25981–26004 Reverse CTTGATTGTGATATTGACGCAGTC D178 57.5 42 24
4 25981–26004 Reverse CTTGATTGTGATATTGACGCAGTT N178 57.0 38 24
5 26047–26068 Reverse CCATCATCTTAACGTCGGTCTC E200 57.3 50 22
6 26047–26068 Reverse CCATCATCTTAACGTCGGTCTT K200 56.9 45 22

The polymorphic and mutated bases are in bold and underlined, respectively.