Table 1.
Length of the spacer regions spanning both break points of the 71-kb inversion in Funariidae and their homologous regions in non-inverted genomes
| rps11-rpoB, 5′ end | petD-petN, 3′ end* | trnC-rpoB, 5′ end | rps11-petD, 3′ end | |
|---|---|---|---|---|
| Funariales | ||||
| Disceliaceae | ||||
| Discelium nudum (Dicks.) Brid. | † | 254† (EF173139) | ||
| Funariaceae | ||||
| Aphanorrhegma serrata (Hook. and Wils.) Sull. | 220 (EF173134) | 698 (EF173158) | ||
| Entosthodon bonplandii (Hook.) Mitt. | 239 (EF173127) | 685 (EF173153) | ||
| Entosthodon laevis (Mitt.) Fife | 220 (EF173128) | 697 (EF173151) | ||
| Entosthodon serratus (Brid.) Fife | 221 (EF173130) | 686 (EF173156) | ||
| Funaria hygrometrica Hedw. 1 | 227 (EF173137) | 667 (EF173160) | ||
| Funaria hygrometrica Hedw. 2 | 227 (EF173138) | 669 (EF173161) | ||
| Funaria flavicans Michx. | 227 (EF173136) | 669 (EF173159) | ||
| Funariella curviseta (Schwägr.) Milde | 220 (EF173129) | 692 (EF173152) | ||
| Goniomitrium acuminatum Hook. and Wils. | 222 (EF173124) | 283† (EF173141) | ||
| Goniomitrium seroi Casas | 222 (EF173125) | — | ||
| Physcomitrella patens (Hedw.) Bruch and Schimp. | 220 (EF173135) | 696 (EF173157) | ||
| Physcomitrium lorentzii C.A. Müller | 220 (EF173133) | 264† (EF173142) | ||
| Physcomitrium pyriforme (Hedw.) Hampe 1 | 221 (EF173131) | 697 (EF173154) | ||
| Physcomitrium pyriforme (Hedw.) Hampe 2 | 220 (EF173132) | 690 (EF173155) | ||
| Pyramidula tetragona (Brid.) Brid. | 231 (EF173126) | 270† (EF175217) | ||
| Gigaspermaceae | ||||
| Chamaebryum pottioides Thér. and Dixon | 264 (EF173146) | 969 (EF175218) | ||
| Gigaspermum repens (Hook.) Lindb. | 285 (EF173143) | |||
| Lorentziella imbricata (Mitt.) Broth. | 279 (EF173145) | |||
| Oedipodiella australis (Wager and Dixon) Dixon | 285 (EF173144) | |||
| Encalyptales | ||||
| Encalypta armata Dusén | 236 (EF173121) | 716 (EF173150) | ||
| Bryobrittonia longipes (Mitt.) D.G. Horton | 232 (EF173123) | — | ||
| Bryobartramia novae-valesiae (Broth. ex G. Roth) I.G. Stone and G.A.M. Scott | 238 (EF173122) | 293† (EF173140) | ||
| OUTGROUP TAXA | ||||
| Diphyscium foliosum (Hedw.) D. Mohr | 264 (EF173147) | 526 (AY911401) | ||
| Timmia megapolitana Hedw. | 303 (EF173148) | — | ||
| Brachythecium salebrosum (Hoffm. ex F. Weber and D. Mohr) Schimp. | 290 (EF173149) | 309 (AY911404) |
All sequences were deposited in GenBank.
–, Amplicon obtained but no sequence available.
* Unless otherwise noted, the petN-petD region includes the petN-trnC spacer, trnC (70 bp) and the trnC-petD spacer.
† trnC-petD spacer only.