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. Author manuscript; available in PMC: 2011 Jan 12.
Published in final edited form as: Biochemistry. 2010 Jan 12;49(1):179–194. doi: 10.1021/bi901357r

Table 5.

Summary of the direction of fluorescence changes for cation-induced folding of Tel22.

ODN Location Stackeda Mobility Change in
fluorescence
intensity
(U → F)
Change in
polarization
(U → F)
Change in
fluorescence
intensity for
kinetic steps
Na+ (50 mM)
AP1 core yes fixed b c↓↓↓
AP7 loop 1 no mobile ↑↑
AP13 loop 2 yes fixed ↓↓
AP19 loop 3 yes mobile ↓↑
K+ (3 mM)
AP1 core ↑↓→
AP7 loop 1 ↑↓↓
AP13 loop 2 ↑↓↓
AP19 loop 3 ↑↓↑
K+ (33 mM)
AP1 core ↑↓
AP7 loop 1 ↑↓
AP13 loop 2
AP19 loop 3 ↑↓
a

Determined from the NMR structure of Tel22 (14)

b

↑ = increase, ↓ = decrease, → = no significant change.

c

In order of steps 1, 2 and 3.