Table 2.

Genetic association results for SNPs in the bronchodilator response Bayesian network.

SNP	CHR	BP	Gene	Minor allele	Observed genotypes		Allelic OR	Allelic p-value	Genotypic p-value	Bayes Factor
					Cases*	Controls*
rs880028	7	50537630	DDC	3	11/36/66	2/74/119	1.38	0.10	0.0011	18.95
rs163688	12	61378399	PPM1H	4	13/39/61	7/50/138	2.06	0.00028	0.0025	8.56
rs6711781	2	218727362	IL8RA	3	5/17/91	0/42/153	1.12	0.66	0.0060	5.90
rs7971621	12	62546881	SRGAP1	3	0/18/95	1/12/182	2.32	0.018	0.016	4.45
rs10052709	5	158693055	IL12B	3	4/16/93	1/50/144	0.77	0.32	0.011	3.94
rs4791036	17	62227597	PRKCA	2	1/32/80	0/32/163	1.98	0.0082	0.017	3.21
rs1110904	12	123549569	NCOR2	4	7/29/77	5/81/109	0.77	0.21	0.010	3.09
rs11172796	12	57565927	LRIG3	4	0/27/86	1/24/170	1.90	0.024	0.024	2.50
rs10879312	12	70361002	TMEM19	4	1/29/83	0/29/166	1.98	0.011	0.025	2.32
rs9468	17	41457408	MAPT	2	6/54/53	13/60/122	1.46	0.047	0.012	1.93
rs7302672	12	62512629	LOC341315	3	7/25/81	5/70/120	0.81	0.32	0.019	1.65
rs4963519	12	6801913	GPR162	4	4/29/80	0/45/150	1.50	0.089	0.024	1.46
rs1493193	12	50192616	LOC283400	2	0/16/97	0/15/180	1.91	0.077	NA	1.07
rs7310083	12	68347053	VMD2L3	4	1/12/100	0/27/168	0.89	0.73	0.31	0.23
CL11302‡	17	43186946	TBX21	4	3/16/94	1/27/167	1.34	0.32	0.27	0.20

The Bayes Factor column contains Bayes factors that indicate how many times more likely it is that bronchodilator response is dependent on, rather than independent of, a SNP. It is the most consistent with the genotypic model p-values because it is also based on the genotype distribution of each SNP.

^*Shows homozygous minor/heterozygous/homozygous major allele genotype counts.

^‡No NCBI ID available for this marker.

BP: Base pair; CHR: Chromosome; OR: Odds ratio.