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. 2009 Nov 11;26(2):242–249. doi: 10.1093/bioinformatics/btp624

Table 1.

Distribution of SNPs across strata: roughly 99% of the SNPs exceed the suggested SNP QC threshold (0.25)

SNP QC Dataset A Dataset B
0.00–0.01 0.0063 0.0027
0.01–0.05 0.0027 0.0016
0.05–0.25 0.0047 0.0039
0.25–1.00 0.9863 0.9918