Table 5.

Experimental results of the GENIA subcategory annotations plus AIMed and GENETAG, respectively

No.	Data	Criterion	Precision	Recall	F-score
1	AIMed+ molecule+ subunit	Exact	81.69	66.67	73.42
		Partial	91.39	74.58	82.14
	AIMed+ molecule+ subunit+ complex	Exact	77.78	66.16	71.50
		Partial	91.14	77.52	83.78
	AIMed+ molecule+ subunit+ complex+ domain	Exact	76.45	67.18	71.52
		Partial	89.39	78.54	83.62
2	GENETAG+ molecule+ family	Exact	71.08	55.03	62.03
		Partial	87.40	67.66	76.27
	GENETAG+ molecule+ family+ subunit+ complex+ domain	Exact	69.90	58.28	63.56
		Partial	85.30	71.11	77.56
3	AIMed+ DNA	Exact	75.69	41.76	53.83
		Partial	87.96	48.53	62.55
	AIMed+ filtered DNA	Exact	80.48	42.66	55.76
		Partial	92.29	48.91	63.94
4	GENETAG+ DNA	Exact	69.82	36.44	47.89
		Partial	83.97	43.82	57.59
	GENETAG+ filtered DNA	Exact	76.57	35.18	48.21
		Partial	92.70	42.60	58.38
5	AIMed+ molecule+ subunit+ complex+ filtered DNA	Exact	77.49	67.69	72.26
		Partial	91.37	79.82	85.21
	AIMed+ molecule+ subunit+ complex+ domain+ filtered DNA	Exact	75.78	68.33	71.86
		Partial	89.09	80.33	84.49
	GENETAG+ molecule+ family+ subunit+ complex+ domain+ filtered DNA	Exact	70.97	66.14	68.47
		Partial	85.14	79.34	82.14
	GENETAG+ molecule+ family+ subunit+ complex+ domain+ filtered DNA+ RNA	Exact	71.34	67.02	69.11
		Partial	84.82	79.68	82.17
6	pure AIMed	Exact	80.44	75.10	77.68
		Partial	88.24	82.38	85.20
	AIMed + GENIA Protein	Exact	65.06	67.31	66.16
		Partial	78.89	81.61	80.23
7	pure GENETAG	Exact	71.38	68.00	69.65
		Partial	86.21	82.12	84.11
	GENETAG + GENIA Protein	Exact	69.75	58.48	63.62
		Partial	84.77	71.08	77.33

Here, DNA represents the GENIA DNA_domain_or_region and RNA represents the GENIA RNA_molecule.