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. 2009 Dec 29;10:449. doi: 10.1186/1471-2105-10-449

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Copyright ©2009 Thompson et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Measurement Profile Consistency. Measurement profile consistency for a probeset across experiments. One example is given for each of the two types of ProbeSet probe response classification categories: Significantly differentially expressed (DE) or not. Panel A1 is for a non DE ProbeSet in the Bhattacharjee experimental results and A2 is for the same ProbeSet in the Stearman experiment. B1 and B2 are for a DE ProbeSet in each experiment. Mean intensity for the probe in the sample class (fluorescent units) is on the y-axis and probe index within the given ProbeSet is given on the x-axis. Intensities are not on the same scale for the two experiments since the labelling was done independently; it is the patterns and relative intensities that are conserved.