TABLE 2.
Proposed genes and encoded proteins of the griseobactin gene locus of Streptomyces sp. strain ATCC 700974 and comparison with proteins from databases
Gene | Protein size (no. of amino acids) | Proposed function | Homologue (no. of amino acids)/organism (UniProt accession no.) | Identity, similarity (%) |
---|---|---|---|---|
orf1 | 547 | Phosphoglucomutase | Pgm (555)/E. coli (P36938) | 58, 72 |
orf2 | 422 | Hypothetical protein | ||
dhbG | 79 | Aryl carrier for DHBA | DhbB (312; C-terminal 88 amino acids)/B. subtilis (P45743) | 38, 52 |
EntB (285; C-terminal 78 amino acids)/E. coli (P0ADI4) | 43, 58 | |||
dhbB | 210 | Isochorismatase | DhbB (312; N-terminal 210 amino acids)/B. subtilis (P45743) | 54, 74 |
EntB (285; N-terminal 210 amino acids)/E. coli (P0ADI4) | 44, 66 | |||
dhbE | 545 | DHBA-AMP ligase | DhbE (539)/B. subtilis (P40871) | 65, 77 |
EntE (536)/E. coli (P10378) | 46, 63 | |||
dhbC | 401 | Isochorismate synthase | DhbC (398)/B. subtilis (P45744) | 52, 62 |
EntC (391)/E. coli (P0AEJ2) | 37, 52 | |||
dhbA | 276 | 2,3-Dihydro-DHBA dehydrogenase | DhbA (261)/B. subtilis (P39071) | 49, 64 |
EntA (248)/E. coli (P15047) | 45, 56 | |||
griA | 779 | Siderophore uptake membrane transporter | FepD, FepG (334, 330)/E. coli (P23876, P23877) | 33, 49 |
FhuB (660)/E. coli (P06972) | 27, 42 | |||
FhuB, FhuG (384, 336)/B. subtilis (P49936, P49937) | 29, 47 | |||
griB | 424 | Esterase | Fes (374)/E. coli (P13039) | 30, 41 |
griC | 439 | MFS exporter | HsrA (475)/E. coli (P31474) | |
griD | 67 | MbtH-like protein | MbtH (71)/Mycobacterium tuberculosis (O05821) | 39, 49 |
griE | 2,468 | NRPS | DhbF (2,378)/B. subtilis (P45745) | 47, 61 |
griF | 397 | Amidohydrolase | AbgB (481)/E. coli (P76052) | 24, 34 |
griG | 335 | Siderophore-binding lipoprotein | FhuD (315)/B. subtilis (P37580) | 27, 43 |
griH | 263 | ATPase of siderophore uptake ABC transporter | FepC (271)/E. coli (P23878) | 46, 64 |
orf3 | 339 | Lysine arginine ornithine transport system kinase | ArgK (331)/E. coli (P27254) | 41, 57 |
orf4 | >349 | Methylmalonyl-CoA mutase large subunit | MutB (728; C-terminal 347 amino acids)/ Propionibacterium freudenreichii (P11653) | 68, 79 |