TABLE 2.
Genome features of C. rodentium ICC168
| Parameter | Value |
||||
|---|---|---|---|---|---|
| Chromosome | pCROD1 | pCROD2 | pCROD3 | pCRP3 | |
| Genome size (bp) | 5,346,659 | 54,449 | 39,265 | 3,910 | 3,172 |
| G+C content (%) | 54.7 | 47.2 | 41.8 | 51.0 | 46.8 |
| No. of CDSsa | 4,984 (182) | 60 (5) | 56 (1) | 3 | 8 |
| CDS density (%) | 88.5 | 82.5 | 86.2 | 79.6 | 72.6 |
| No. of tRNAs | 86 | 0 | 0 | 0 | 0 |
| No. of rRNA operons | 7 | 0 | 0 | 0 | 0 |
| No. of miscellaneous RNAs | 56 | 1 | 0 | 0 | 1 |
| No. of prophage regions | 10 | 0 | 0 | 0 | 0 |
| No. of genomic islands | 17 | 0 | 0 | 0 | 0 |
| No. of IS elementsb | 109 (31) | 3 (2) | 1 | 0 | 0 |
a
The numbers in parentheses indicate the numbers of pseudogenes.
b
The numbers in parentheses indicate partial/disrupted IS elements.