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. 2009 Dec 15;9:101. doi: 10.1186/1472-6750-9-101

Table 1.

Summary of conditions and primers used for RT-PCR.

Genes Primer Sequences (5'-3') Cycles Size (bp) Annealing Temperature (°C)
Pluripotency-associated markers
Oct4 F TCTCGCCCCCTCCAGGT 30 218 53
R GCCCCACTCCAACCTGG
Sox2 F GGCAGCTACAGCATGATGCAGGACC 34 130 60
R CTGGTCATGGAGTTGTACTGCAGG
Endodermal-associated markers
FoxA2 F GGGAGCGGTGAAGATGGA 38 89 55
R TCATGTTGCTCACGGAGGAGTA
Gata6 F GAGTGAGAGAAGATGGAAGGG 38 250 55
R CGCACATGAAATCTGGATGTGG
Ectodermal-associated markers
Nestin F CAGCTGGCGCACCTCAAGATG 30 209 55
R AGGGAAGTTGGGCTCAGGACTGG
Pax6 F AACAGACACAGCCCTCACAAACA 30 275 55
R CGGGAACTTGAACTGGAACTGAC
Mesodermal-associated markers
Brachyury F GAACCAGCACCCTGTGTCCAC 38 608 57
R GCCACGACAAAAAGTCACTGC
Goosecoid F CTCAACCAGCTGCACTGTC 38 322 55
R GTCAGCTGTCCGAGTCCAAATC
Control-associated markers
GAPDH F ATGGAGAAGGCTGGGGCTC 28 196 55
R AAGTTGTCATGGATGACCTTG