Table 3.
Class | AA sequence | PSSM | PSSM and predicted secondary structure | Predicted secondary structure | Collocations of H and E segments | Total |
---|---|---|---|---|---|---|
α | 8 | 26 | 52 | 21 | 10 | 117 |
β | 2 | 28 | 9 | 8 | 6 | 53 |
α/β | 0 | 0 | 17 | 17 | 12 | 46 |
α+β | 2 | 11 | 101 | 27 | 22 | 163 |
Multi-domain | 3 | 17 | 43 | 26 | 16 | 105 |
Membrane | 6 | 16 | 18 | 6 | 0 | 46 |
Small | 6 | 6 | 3 | 3 | 0 | 18 |