Table 4.
Average number of hydrogen bonds. Values were calculated according to two different geometric criteria. (a) Criterion 1: distance between donor and acceptor within 3Å and the angle spanned by the donor-hydrogen-acceptor less than 60° (a value of 180° corresponds to fully planar). (b) Criterion 2: distance between donor and acceptor is within 3.5Å and the donor-hydrogen-acceptor angle is less than 30°45.
| Simulation | Distance from Backbone |
Average hydrogen bonds per Water Molecule |
Average water-water hydrogen bonds per Water Molecule |
Average water- TMAO hydrogen bonds per TMAO |
Average number of peptide-water hydrogen bonds |
|---|---|---|---|---|---|
| Water Solution | <4Å | 2.7 | 2.4 | - | 40.1 |
| 4 – 8Å | 2.7 | 2.7 | - | - | |
| 8 – 12Å | 2.7 | 2.7 | - | - | |
| TMAO Solution | <4Å | 2.7 | 2.3 | 1.7 | 36.7 |
| 4 – 8Å | 2.7 | 2.6 | 2.0 | - | |
| 8 – 12Å | 2.7 | 2.6 | 2.0 | - | |
| a. | |||||
| Simulation | Distance from Backbone |
Average hydrogen bonds per Water Molecule |
Average water-water hydrogen bonds per Water Molecule |
Average water- TMAO hydrogen bonds per TMAO |
Average number of peptide-water hydrogen bonds |
| Water Solution | <4Å | 2.5 | 2.2 | - | 29.0 |
| 4 – 8Å | 2.5 | 2.5 | - | - | |
| 8 – 12Å | 2.5 | 2.5 | - | - | |
| TMAO Solution | <4Å | 2.5 | 2.1 | 1.8 | 27.3 |
| 4 – 8Å | 2.5 | 2.4 | 2.1 | - | |
| 8 – 12Å | 2.5 | 2.4 | 2.1 | - | |
| b. | |||||