Table 3.
DNA sequence homology of restriction site polymorphism markers co-locating with seedling drought tolerance QTL in a cowpea recombinant inbred population developed from a cross between homozygous genotypes IT93K503-1 and CB46
| Candidate genea | EMBL accession number | Homologous cowpea EST, E-value | Homologous plant EST, E-value | Coding sequence homology, E-value | EMBL accession number |
|---|---|---|---|---|---|
| VuYCF | FM991890 | FC462222, 1.5e-34 | DT036854 water deficit-stressed Vitis vinifera EST, 7.1e-93 | Phaseolus vulgaris photosystem I assembly protein ycf3, 1.3e-18 | ABW22791 |
| VuDCG-1a | FM991891 | FF552859, 1.7e-18 | CX702472 water deficit stressed Glycine max EST, 4.7e-83 | Vitis vinifera hypothetical protein, 7.5e-29 | CA070310 |
| VuMRP | FM991892 | FC456737, 1.8e-56 | DY674830 cold-stressed Fragaria vesca EST, 1.7e-49 | Zea mays multidrug resistance-associated protein 3, 1.0e-39 | CAW45311 |
| VuDCG-2 | FM991893 | FG885319, 2.6e-12 | – | – | |
| VuDCG-3 | FM991894 | FF403513, 4.2e-10 | – | – | |
| VuDCG-4 | FM991895 | FG934687, 5.6e-14 | EX660997 salt-stressed Fragaria vesca EST, 6.6e-07 | Vitis vinifera hypothetical protein, 2.9e-06 | CAO43929 |
| VuDCG-5 | FM991896 | FG843420, 5.5e-11 | DT039173 water deficit-stressed Vitis vinifera EST, 2.4e-05 | Vitis vinifera hypothetical protein 3.2e-05 | CAN76904 |
a VuYCF Vigna unguiculata photosystem I assembly protein ycf, VuDCG Vigna unguiculata drought candidate gene, VuMRP Vigna unguiculata multidrug resistance-associated protein