Table 2.
Sp | Bp | N | ΔF + ≥11 | Bp + = Bp−2 | ΔF −≥ 13 | F + 1≥14 | F−1≥15 | Fr−16 | Fr−2 | Fr−3 | Fr+1 ≥ Fr−1 | F+1 < F−1 | Fr−1 | Fr−2 | Fr−3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Hs | 400 | 1000 | 1000 | 202 | 202 | 1000 | 178 | 122 | 44 | 12 | 981 | 197 | 6 | 12 | 1 |
Dm | 1000 | 1000 | 214 | 214 | 998 | 204 | 161 | 37 | 6 | 979 | 20 | 10 | 7 | 3 | |
At | 1000 | 1000 | 30 | 30 | 999 | 29 | 21 | 8 | 0 | 992 | 7 | 5 | 2 | 0 | |
Hs | 350 | 1000 | 1000 | 254 | 254 | 999 | 223 | 151 | 56 | 16 | 971 | 29 | 8 | 20 | 1 |
Dm | 1000 | 1000 | 264 | 264 | 999 | 257 | 197 | 50 | 10 | 973 | 26 | 14 | 9 | 3 | |
At | 1000 | 1000 | 50 | 50 | 998 | 49 | 33 | 15 | 0 | 993 | 5 | 4 | 1 | 0 | |
Hs | 300 | 1000 | 1000 | 314 | 314 | 999 | 271 | 179 | 72 | 20 | 957 | 43 | 14 | 26 | 1 |
Dm | 1000 | 1000 | 342 | 342 | 999 | 327 | 241 | 71 | 15 | 961 | 38 | 17 | 16 | 5 | |
At | 1000 | 1000 | 97 | 97 | 998 | 96 | 56 | 33 | 7 | 962 | 19 | 7 | 10 | 2 | |
Hs | 250 | 1000 | 1000 | 388 | 388 | 998 | 326 | 211 | 92 | 23 | 943 | 57 | 15 | 38 | 4 |
Dm | 1000 | 1000 | 428 | 428 | 997 | 406 | 301 | 90 | 15 | 946 | 54 | 25 | 24 | 5 | |
At | 1000 | 1000 | 152 | 152 | 996 | 146 | 79 | 59 | 8 | 981 | 36 | 14 | 19 | 3 | |
Hs | 200 | 1000 | 1000 | 538 | 538 | 996 | 460 | 273 | 152 | 35 | 900 | 100 | 32 | 60 | 8 |
Dm | 1000 | 1000 | 566 | 566 | 992 | 519 | 354 | 133 | 32 | 926 | 72 | 32 | 36 | 4 | |
At | 1000 | 1000 | 249 | 249 | 993 | 242 | 124 | 98 | 20 | 929 | 69 | 28 | 35 | 6 | |
Hs | 150 | 1000 | 1000 | 699 | 699 | 994 | 590 | 333 | 198 | 59 | 842 | 158 | 53 | 87 | 18 |
Dm | 1000 | 1000 | 723 | 723 | 986 | 651 | 398 | 204 | 49 | 865 | 135 | 44 | 82 | 9 | |
At | 1000 | 1000 | 430 | 430 | 989 | 412 | 186 | 183 | 43 | 868 | 129 | 40 | 70 | 19 |
“ΔF+” is for PBI considering the “+” strand.
“Bp+ = Bp−” is to indicate that ORF size is the same for “+” and “−” strands.
“ΔF−” is for PBI considering the “−” strand.
“F+1” is for f1 considering the “+” strand.
“F−1” is for f1 considering the “−” strand.
“Fr−” is for the real frame of the CDS, i.e. Fr−1 for frame −1, Fr −2 for frame −2 and Fr −3 for frame −3, respectively,
The gray area is for error rate of coding frame diagnosis ≤5%.