Table 3.
Results of manual curation.
| cow vs. human | human vs. cow | |||||||
|---|---|---|---|---|---|---|---|---|
| potential orthologs |
gene variants |
new genes |
intronic | potential orthologs |
gene variants |
new genes |
intronic | |
| pseudogenes and retrotransposed | 17 | |||||||
| potential orthologs | 6 | 2 | 13 | |||||
| different length and structure | 142 | 103 | 32 | |||||
| additional exons | 20 | |||||||
| unreliable | 12 | 31 | 3 | 4 | 11 | 105 | 8 | |
| overlap Genscan or EST, potential new genes | 64 | 13 | ||||||
| no evidence, potential new genes | 46 | |||||||
| overlap different genes | 16 | |||||||
| gene variants | 144 | |||||||
| problems in annotation | 25 | 2 | ||||||
| new genes/partial | 125/55 | |||||||
| nested genes | 11 | |||||||
| examined (>75% identity) | 177(883) | 154 | 112 | 15 | 65 | 180 | 287 | 19 |
| total | 1121 | 260 | 297 | 60 | 120 | 500 | 294 | 43 |
Number of genes for each category are reported.