Table 2. Some putative orthologs to Arabidopsis genes displaying differential expression between nectary type by EST hit number.
| No. of ESTs generating hits against Arabidopsis locusb | |||||||||
| Arabidopsis locusa | TAIR annotation | MLN-1 | MMN-1 | MLN-2 | MMN-2 | All MLN | All MMN | AtMLM:: AtMMNc | P-value |
| At2g39060 | nodulin MtN3 family proteind | 78 | 11 | 12 | 15 | 90 | 26 | 1.08 | 0.50 |
| At5g55450 | protease inhibitor/seed storage/lipid transfer protein (LTP) family proteind | 19 | 0 | 8 | 0 | 27 | 0 | 0.89 | 0.61 |
| At3g52930 | fructose-bisphosphate aldolase, putative | 10 | 2 | 8 | 3 | 18 | 5 | 0.80 | 0.22 |
| At1g60950 | FED A (FERREDOXIN 2) | 10 | 1 | 6 | 1 | 16 | 2 | 0.82 | 0.18 |
| At4g28240 | Wound-responsive protein-related | 7 | 1 | 3 | 0 | 10 | 1 | 0.79 | 0.53 |
| At1g74820 | cupin family proteind | 1 | 244 | 4 | 75 | 5 | 319 | 0.02 | 0.00 |
| At2g42530 | COR15B | 0 | 20 | 0 | 4 | 0 | 24 | 0.88 | 0.16 |
| At1g77110 | PIN6 (PIN-FORMED 6) | 0 | 2 | 0 | 7 | 0 | 9 | 0.93 | 0.62 |
| At5g02120 | OHP (ONE HELIX PROTEIN) | 1 | 13 | 1 | 3 | 2 | 16 | 1.44 | 0.28 |
| At5g15800 | SEP1 (SEPALLATA1) | 1 | 7 | 0 | 3 | 1 | 10 | 0.71 | 0.05 |
a
Locus identified by blastx searches of B. rapa contigs against Arabidopsis proteins (TAIR9 annotation release).
b
Number of ESTs within contigs and singleton sequences generating hits against Arabidopsis loci, listed by individual library.
c
Affymetrix ATH1 mean signal probe ratio; original raw data from [17].
d
Differential expression verified by RT PCR, results shown in Fig. 3.
e
Expression pattern also previously verified for ortholog to A1g77110 (Ruhlmann and Carter, in preparation).