Table 4.
Oligonucleotides Used in the Construction of PAX3-NCOA1 and PAX3-NCOA2 Deletion Mutants
Gene | Primer | Sequence |
---|---|---|
PAX3- NCOA1 type 1 |
AD1-PN1.1-357u | GCTATAAATCAGAGTAAATCAGCTCTTGAACAGCTGGTATCC′ |
AD1-PN1.1-357l | GGATACCAGCTGTTCAAGAGCTGATTTACTCTGATTTATAGC | |
AD1-PN1.1-417u | GCTATAAATCAGAGTAAATCGGTGGATTAGATGTATTATCAGAG | |
AD1-PN1.1-417l | CTCTGATAATACATCTAATCCACCGATTTACTCTGATTTATAGC | |
AD2-PN1.1-697-727u | GTTCCCCAAGGTGAGGCCAACGCCTCCGGGTATCAGACATGA | |
AD2-PN1.1-697-727l | TCATGTCTGATACCCGGAGGCGTTGGCCTCACCTTGGGGAAC | |
PAX3- NCOA1 type 2 |
AD1-PN1.2-495u | GAAGACCAGTGTATTAGCGAGAAGGCTTCTTCTTGA |
AD1-PN1.2-495l | TCAAGAAGAAGCCTTCTCGCTAATACACTGGTCTTC | |
AD1-PN1.2-549u | GAAGACCAGTGTATTAGCGGTGGATTAGATGTATTAATCAG | |
AD1-PN1.2-549l | CTGATTAATACATCTAATCCACCGCTAATACACTGGTCTTC | |
AD2-PN1.2-835-865u | GGTGAGGCCAACTTTGCTCCATCTCTAGACATGAAGGCCTGGCAGCAA | |
AD2-PN1.2-835-865l | TTGCTGCCAGGCCTTCATGTCTAGAGATGGAGCAAAGTTGGCCTCACC | |
PAX3- NCOA2 |
AD1-PN2-649u | GCCAGCCAAAACAGGCAGCCAGACCAGGTGTATCTGGCCTTGCGG |
AD1-PN2-649l | CCGCAAGGCCAGATACACCTGGTCTGGCTGCCTGTTTTGGCTGGC | |
AD1-PN2-739u | GCCAGCCAAAACAGGCAGCCAGACCAGGTAGCTATTCGCCCATGCAAGATCCA | |
AD1-PN2-739l | TGGATCTTGCATGGGCGAATAGCTACCTGGTCTGGCTGCCTGTTTTGGCTGGC | |
AD2- PN2-898-93u | CAGCAGTTTCCATTTCCTCCAAACTACCCAACAGTCTCAGGCCAACCCAGCC | |
AD2- PN2-898-931 | GGCTGGGTTGGCCTGAGACTGTTGGGTAGTTTGGAGGAAATGGAAACTGCTG |
u= upper strand primer; l=lower strand primer