Table 3. Model-Independent Linkage Results for SNPs on 17q11.2.
Marker | Position* (Mb) | Associated Gene | Familial Idiopathic Scoliosis Families with Males Treated with Surgery | Location | |
---|---|---|---|---|---|
Single-point (P value) | Multi-point (P value) | ||||
rs1472081 | 24.42 | --† | 0.01827§ | 0.19811 | Unknown |
rs8067041 | 24.5 | MYO18A | 0.31121 | 0.19735 | Intron |
rs6505114 | 24.52 | MYO18A | 0.63171 | 0.19713 | Intron |
rs894606 | 24.93 | GIT1 | 0.65590 | 0.19514 | Intron |
rs3110492 | 24.95 | -- | 0.02810 | 0.19506 | Unknown |
d17s975 | 25.12 | SSH2 | 0.00037 | 0.19371 | Intron |
rs2467334 | 25.16 | SSH2 | 0.18985 | 0.19349 | Intron |
rs4436830 | 25.41 | EFCAB5 | 0.17881 | 0.18809 | Intron |
rs4325622 | 25.55 | SLC6A4 | 0.00028 | 0.10264 | Intron |
rs2066713 | 25.58 | SLC6A4 | 0.00241 | 0.09264 | Intron |
rs3816828 | 25.62 | BLMH | 0.46811 | 0.07718 | Intron |
rs7342921 | 25.64 | BLMH | 0.00409 | 0.00945 | Exon |
rs3794794 | 25.74 | CPD | 0.09817 | 0.07765 | Intron |
rs2191351 | 25.78 | CPD | 0.05990 | 0.07954 | Intron |
rs170053 | 25.92 | -- | 0.07734 | 0.08812 | Unknown |
rs2905787 | 26.51 | NF1 | 0.36028 | 0.16494 | Intron |
rs2057769 | 26.72 | NF1 | 0.42398 | 0.20561 | Intron |
rs2107359 | 26.72 | NF1 | 0.68507 | 0.20578 | Intron |
rs2074153 | 26.88 | Rab11-FIP4 | 0.00331 | 0.20277 | Intron |
rs739630 | 26.9 | -- | 0.03891 | 0.20302 | Unknown |
rs886224 | 27.25 | -- | 0.79680 | 0.21401 | Intron |
rs753750 | 27.64 | RHBDL3 | 0.05750 | 0.23211 | Intron |
Genes: MYO18A = myosin 18A isoform b, GIT1 = G protein-coupled receptor kinase interactor 1, SSH2 = Protein phosphatase Slingshot homolog 2, EFCAB5 = EF-hand calcium binding domain 5, SLC6A4 = solute carrier family 6 member 4, BLMH = Bleomycin hydrolase, CPD = carboxypeptidase D precursor, NF1 = neurofibromin isoform 1, Rab11-FIP4 = Rab11 family interacting protein 4, RHBDL3 = rhomboid, veinlet-like 3
From www.genome.ucsc.edu
No gene association.
Boldface indicates statistically significant values (P ≤ 0.05)