Table 3.

Examples of gene expression search API links

Description	Query
Retrieve all Atlas data on genes with InterPro ID IPR003822	http://www.ebi.ac.uk/gxa/api?geneInterProIdIs=IPR003822
Retrieve all Atlas data on genes with GO IDs GO:0003006 or GO:0005000	http://www.ebi.ac.uk/gxa/api?geneGOIdIs=GO:0003006+GO:0005000
Retrieve data on a specific experiment in Atlas	http://www.ebi.ac.uk/gxa/api?experiment=E-GEOD-2487
Retrieve complete differential gene expression analysis output for a specified experiment and a list of genes	http://www.ebi.ac.uk/gxa/api?experiment=E-MEXP-1190&gene=ENSMUSG00000040017, &gene=ENSMUSG00000055923