Table 1.
Pathema clade | Target NIAID pathogen | Organisms supported | Completed genomes | Draft genomes | NIAID category | Associated disease |
---|---|---|---|---|---|---|
Bacillus | 40 | 21 | 19 | |||
Bacillus anthracis | 19 | 6 | 13 | A | Anthrax | |
Burkholderia | 41 | 24 | 18 | |||
Burkholderia mallei | 10 | 4 | 6 | B | Glanders | |
Burkholderia pseudomallei | 12 | 4 | 8 | B | Melioidosis | |
Clostridium | 36 | 23 | 13 | |||
Clostridium botulinum | 15 | 10 | 5 | A | Botulism | |
Clostridium perfringens | 9 | 3 | 6 | B | Enterotoxemia | |
Entamoeba | 3 | 3 | 0 | |||
Entamoeba histolytica | 1 | 1 | 0 | B | Amebiasis | |
Total Pathema | 120 | 71 | 50 |
A complete list of supported organisms is included in Supplementary Table S1.