Table 1.
Differences between IMEx and light curation
| Annotation | IMEX curation | LIGHT curation | Additional information/examples | |
|---|---|---|---|---|
| Publication | Reference | √ | √ | PMID/D.O.I. |
| Interaction | Figure | √ | √ | Figure, Table |
| Interaction | Interaction type | √ | √ | Direct, physical, enzymatic reaction |
| Experiment | Detection method | √ | √ | Co-immunoprecipitation, two-hybrid |
| Experiment | Biosource | √ | Taxid, cell type, tissue | |
| Interactor | Author given name | √ | √ | |
| Interactor | Cross reference | √ | √ | Uniprotkb, refseq |
| Interactor | Organism | √ | √ | Taxid |
| Interactor | Experimental role | √ | √ | Bait/prey |
| Interactor | Biological role | √ | Enzyme, enzyme target western blot | |
| Interactor | Participant identification | √ | ||
| Interactor | Expression level | √ | Endogenous/over-expressed purification | |
| Interactor | Sample process | √ | ||
| Interactor | Tag | √ | ||
| Interactor | Binding site | √ | Range, domain | |
| Interactor | Modification | √ | Phosphorylation, resulting/required position, amino-acids | |
| Interactor | Mutation | √ |