Table 2.
Category | Definition | Number of representative HITs | Percentage |
---|---|---|---|
I | Identical to knowna human protein (≥98% identity, =100% coverage) | 13 314 | 37.71 |
II | Similar to knowna protein (≥50% identity, ≥50% coverage) | 3380 | 9.57 |
III | InterPro domain containing protein | 2584 | 7.32 |
IV | Conserved hypothetical protein | 4584 | 12.98 |
V | Hypothetical protein | 5203 | 14.74 |
VI | Hypothetical short protein (20–79 amino acids) | 5446 | 15.43 |
VII | Pseudogene candidates | 901 | 2.55 |
Total | 35 303 | 100.00 |
a‘Known’ proteins are experimentally validated proteins in literatures.