Table 2.
Diversity in the PbGP43 polyadenilation cleavage sites, which are also indicated (bold and italics) in the sequence below.
| Cleavage sites | P. brasiliensis isolates | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | 7 | 8 | 10 | 12 | 14 | clones/site | base | |
| 1420 | 1 | 1 | G | |||||||||
| 1423 | 4 | 5 | 2 | 1 | 2 | 14 | C | |||||
| 1425 | 1 | 1 | C* | |||||||||
| 1427 | 1 | 1 | 3 | 1 | 6 | T | ||||||
| 1429 | 1 | 1 | C* | |||||||||
| 1430 | 1 | 1 | 1 | 3 | T | |||||||
| 1434 | 5 | 1 | 1 | 2 | 1 | 10 | T | |||||
| 1439 | 1 | 1 | 2 | 1 | 5 | G | ||||||
| 1441 | 1 | 1 | 1 | 3 | C | |||||||
| 1451 | 1 | 1 | 1 | 1 | 4 | C | ||||||
| 1453 | 1 | 1 | 2 | C* | ||||||||
| 1454 | 3 | 1 | 4 | T | ||||||||
| 1457 | 1 | 1 | 2 | T | ||||||||
| Total amplicons | 6 | 4 | 4 | 5 | 8 | 6 | 4 | 5 | 10 | 4 | 56 | |
1330tgggactttttacggcttggagcgtaggagaacagctgattatttacgtttacatgtttaacttttattaagaaatggaaaggcttaattgaacacttactaattaattgacattgtttttcactactatccatttgtat 1470
* after this base there is a different base from A