Table 1.
Characteristics of the O. anthropi strains of human origin.
| Strains | MSCC | eBCC | ST | Allelic profiles | PFGE cluster | Origin | Region, country and year of isolation | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| dnaK | recA | rpoB | aroC | omp25 | trpE | gap | |||||||
| CCUG34461 | MSCC1 | eBCC1 | 1 | 1 | 1 | 4 | 1 | 9 | 7 | 4 | ND | Trachea | Tromsö, Norway, 1995 |
| CIP103948 | MSCC1 | eBCC1 | 1 | 1 | 1 | 4 | 1 | 9 | 7 | 4 | ND | Foot Wound | Fr, 1978 |
| ADV17 | MSCC11 | eBCC1 | 2 | 1 | 4 | 7 | 6 | 1 | 7 | 4 | I | Digestive tract (c) | Montpellier, Fr, 2001 |
| ADV23 | MSCC4 | eBCC4 | 3 | 4 | 1 | 1 | 1 | 1 | 4 | 1 | IV | Bone marrow (i) | Montpellier, Fr, 2002 |
| ADV34 | MSCC4 | eBCC4 | 3 | 4 | 1 | 1 | 1 | 1 | 4 | 1 | VI | Digestive tract (c) | Montpellier, Fr, 2003 |
| ADV77 | MSCC4 | eBCC4 | 3 | 4 | 1 | 1 | 1 | 1 | 4 | 1 | II | Digestive tract (c) | Montpellier, Fr, 2006 |
| ADV8 | MSCC4 | eBCC4 | 3 | 4 | 1 | 1 | 1 | 1 | 4 | 1 | I | Digestive tract (c) | Montpellier, Fr, 1999 |
| ADV97 | MSCC4 | eBCC4 | 3 | 4 | 1 | 1 | 1 | 1 | 4 | 1 | Vb | Digestive tract (c) | Montpellier, Fr, 2007 |
| NAN63 | MSCC4 | eBCC4 | 3 | 4 | 1 | 1 | 1 | 1 | 4 | 1 | II | Blood (i) | Nancy, Fr, 2005 |
| ADV29 | MSCC4 | eBCC4 | 4 | 4 | 1 | 1 | 1 | 9 | 4 | 1 | IV | Urine (i) | Montpellier, Fr, 2002 |
| ADV48 | MSCC4 | eBCC4 | 4 | 4 | 1 | 1 | 1 | 9 | 4 | 1 | III | Respiratory tract (c) | Montpellier, Fr, 2004 |
| ADV61 | MSCC4 | eBCC4 | 4 | 4 | 1 | 1 | 1 | 9 | 4 | 1 | IV | Respiratory tract (c) | Montpellier, Fr, 2005 |
| CCUG28303 | MSCC4 | eBCC4 | 4 | 4 | 1 | 1 | 1 | 9 | 4 | 1 | ND | Blood (i) | Göteborg, Sw, 1991 |
| LMG34 | MSCC4 | eBCC4 | 4 | 4 | 1 | 1 | 1 | 9 | 4 | 1 | ND | Pleural fluid (i) | Denmark, NA |
| ADV38 | MSCC4 | eBCC4 | 5 | 4 | 1 | 1 | 1 | 5 | 4 | 1 | IV | Digestive tract (c) | Montpellier, Fr, 2003 |
| CCUG20020 | MSCC4 | eBCC4 | 5 | 4 | 1 | 1 | 1 | 5 | 4 | 1 | ND | Blood (i) | Göteborg, Sweden, 1991 |
| LMG5435 | MSCC4 | eBCC4 | 5 | 4 | 1 | 1 | 1 | 5 | 4 | 1 | ND | Blood (i) | UK, 1983 |
| ADV40 | S | S | 6 | 5 | 4 | 1 | 11 | 6 | 1 | 7 | VI | Digestive tract (c) | Montpellier, Fr, 2003 |
| ADV53 | MSCC4 | eBCC4 | 7 | 4 | 1 | 1 | 9 | 9 | 4 | 1 | IV | Throat (c) | Montpellier, Fr, 2004 |
| ADV99 | MSCC4 | eBCC4 | 7 | 4 | 1 | 1 | 9 | 9 | 4 | 1 | IV | Blood (i) | Montpellier, Fr, 2007 |
| ADV64 | MSCC4 | eBCC4 | 8 | 4 | 1 | 1 | 8 | 7 | 4 | 1 | VI | Wound (i) | Montpellier, Fr, 2005 |
| ADV72 | MSCC4 | eBCC4 | 9 | 4 | 1 | 1 | 6 | 5 | 4 | 1 | III | Digestive tract (c) | Montpellier, Fr, 2006 |
| ADV74 | S | eBCC21 | 10 | 5 | 1 | 3 | 3 | 8 | 11 | 9 | III | Digestive tract (c) | Montpellier, Fr, 2006 |
| ADV75 | MSCC11 | eBCC1 | 11 | 1 | 4 | 7 | 1 | 6 | 7 | 4 | IV | Respiratory tract (c) | Montpellier, Fr, 2006 |
| ADV79 | S | eBCC1 | 12 | 1 | 4 | 7 | 10 | 6 | 7 | 4 | I | Respiratory tract (c) | Montpellier, Fr, 2006 |
| ADV88 | MSCC1 | eBCC1 | 13 | 1 | 1 | 4 | 1 | 1 | 6 | 4 | II | Digestive tract (c) | Montpellier, Fr, 2007 |
| ADV90 | S | S | 14 | 4 | 1 | 2 | 9 | 9 | 12 | 10 | IV | Digestive tract (c) | Montpellier, Fr, 2007 |
| ADV91 | MSCC4 | eBCC4 | 15 | 4 | 1 | 9 | 1 | 1 | 5 | 1 | Vb | Digestive tract (c) | Montpellier, Fr, 2007 |
| CCUG33786 | MSCC4 | eBCC4 | 15 | 4 | 1 | 9 | 1 | 1 | 5 | 1 | ND | Blood (i) | Jönköping, Sw, 1995 |
| ADV92 | MSCC4 | eBCC4 | 16 | 4 | 1 | 1 | 1 | 6 | 4 | 1 | I | Respiratory tract (i) | Montpellier, Fr, 2007 |
| CCUG1235 | S | S | 22 | 5 | 4 | 7 | 1 | 6 | 14 | 12 | ND | Kidney transplant | Göteborg, Sw, 1971 |
| CLF18 | MSCC4 | eBCC4 | 23 | 4 | 1 | 1 | 13 | 1 | 4 | 1 | I | Throat (c) | Clermont-Ferrand, Fr, 1998 |
| CLF19 | S | S | 24 | 5 | 4 | 7 | 11 | 1 | 1 | 12 | III | Throat (c) | Clermont-Ferrand, Fr, 2000 |
| CLF20 | MSCC1 | eBCC1 | 25 | 1 | 1 | 4 | 1 | 9 | 2 | 4 | Va | Throat (c) | Clermont-Ferrand, Fr, 2000 |
| DNK118 | MSCC4 | eBCC4 | 26 | 4 | 1 | 12 | 1 | 9 | 5 | 1 | ND | Blood (i) | Denmark, 1996 |
| NIM27 | MSCC1 | eBCC1 | 32 | 1 | 1 | 4 | 10 | 2 | 7 | 4 | I | Blood (i) | Nîmes, Fr, 2002 |
| LMG3298 | MSCC4 | eBCC4 | 36 | 4 | 1 | 1 | 15 | 9 | 4 | 1 | ND | Blood (i) | Louisiana, USA, 1977 |
| LMG3303 | MSCC1 | eBCC1 | 37 | 1 | 1 | 4 | 1 | 14 | 7 | 4 | ND | Blood (i) | Fr, 1982 |
| NIM123 | MSCC11 | eBCC1 | 40 | 1 | 4 | 7 | 11 | 6 | 7 | 4 | ND | Eyes | Nîmes, Fr, 2002 |
| NIM28 | MSCC4 | eBCC4 | 41 | 4 | 1 | 4 | 10 | 6 | 4 | 1 | I | Wound (i) | Nîmes, Fr, 2002 |
| TOUL49 | S | S | 42 | 1 | 1 | 7 | 9 | 10 | 7 | 4 | Vb | Respiratory tract (i) | Toulouse, Fr, 2004 |
| TOUL58 | MSCC4 | eBCC4 | 43 | 4 | 1 | 1 | 7 | 7 | 4 | 1 | I | Respiratory tract (i) | Toulouse, Fr, 2004 |
| TOUL59 | S | S | 44 | 5 | 3 | 4 | 9 | 5 | 1 | 8 | VI | Respiratory tract (i) | Toulouse, Fr, 2004 |
| ATCC 49188T | MSCC4 | eBCC4 | 4 | 4 | 1 | 1 | 1 | 9 | 4 | 1 | Va | Probably clinical | NA, before 1988 |
Minimum Spanning Clonal Complex (MSCC), eBURST clonal complex (eBCC), sequence type (ST) designation, allelic profiles and PFGE clusters at 60% similarity level. Life-style is indicated in the origin column: (i) for infection, (c) for colonization or carriage. S, singleton; ND, not determined; NA, not available, Fr, France, Sw, Sweden, UK, United Kingdom.