Table 1. Summary statistics for pyrosequencing of ESTs from various tissues of Mytilus galloprovincialis.
Species | Mytilus galloprovincialis | |||
Tissue | D. gland | Foot | Gill | Mantle |
Total No. of reads | 33,992 | 31,227 | 58,271 | 52,057 |
Total size (bp) | 6,988,845 | 5,984,748 | 12,157,845 | 9,293,253 |
Average length (bp) | 205 | 191 | 208 | 178 |
Total No. of contigs | 2,103 | 724 | 4,713 | 1,046 |
Total No. of contigs with functional assignment against nr | 407 | 145 | 320 | 151 |
Contigs >500 bp | 78 | 24 | 96 | 25 |
Total reads within contigs | 25,428 | 28,682 | 44,178 | 46,180 |
Singleton reads | 8,564 (25%) | 2,545 (8%) | 14,093 (24.2%) | 5,877 (11.3%) |
D.gland–digestive gland. Bp–base pairs. Contigs–assembled contiguous fragments. Nr–NCBI non-redundant protein database.