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. Author manuscript; available in PMC: 2010 Jan 23.
Published in final edited form as: Gene. 2005 Dec 15;365:95–103. doi: 10.1016/j.gene.2005.09.028

Table 3.

Distances (in Å) between amino acids and E113 in the mouse and human pigments, where the corresponding distances between the amino acid and the two wild-type (WT) pigments are >0.05 Å

Amino acid Mouse (P359)a
 Human (P414)
WT F86L TM III TM II TM I– II TM II– III 7 ch. WT 7 ch.
(359) (359) (363) (381) (395) (403) (411) (414) (360)
A42 15.86 15.86 15.94 15.89 16.16 15.96 16.22 16.22 15.90
F43 13.87 13.87 13.95 13.88 13.74 13.94 13.80 13.80 13.88
G45 15.19 15.18 15.26 15.21 15.39 15.27 15.45 15.44 15.22
F89 9.26 9.72 9.31 9.64 9.64 9.68 9.68 9.69 9.17
V91 5.63 5.62 5.71 5.52 5.52 5.58 5.58 5.57 5.62
F92 8.55 8.52 8.63 8.42 8.42 8.48 8.48 8.30 8.44
T93 9.83 9.83 9.91 9.84 9.84 9.90 9.90 9.91 9.84
a

TM I, TM II, and TM III contain AA changes F46T/F49L/T52F, F86L/ T93P, and A114G/S118T, respectively. Note that the λmax-shifts caused by these amino acid changes can differ slightly from those caused by replacing each TM segment (Shi et al., 2001). The 7 ch. in the mouse UVand human blue pigments contain F46T/F49L/T52F/F86L/T93P/A114G/S118T and the reverse changes, respectively (Shi et al., 2001). The numbers in parentheses refer to λmax values of visual pigments.