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. 2009 Nov 5;38(2):441–454. doi: 10.1093/nar/gkp905

Table 2.

Nucleotide sequence of repair junctions formed in mock-depleted extract

TaqαI-BstX1 fragment Joining product No. RE sensitivity Derivation
42-mer TCTCGAGGAACGCGACGTCGCGTCG-N15-A 9/18 BsalH1 Accurate repair
34-mer TCTCGAGGAACGCGTCG-N15-A 6/18 MluI Resection to CGCG
34-mer TCTCGAGGGTCGCGTCG-N15-A 1/18 – Resection to CGCG with inaccurate fill-in
34-mer TCTCGAGGATCGCGTCG-N15-A 1/18 – Resection to CGCG with inaccurate fill-in
21-mer TCTCG-N15-A 1/18 – Resection to CG