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. 2009 Nov 17;38(2):570–584. doi: 10.1093/nar/gkp993

Table 1.

Predictions by the three topological models on the nature of plasmid cohesion

graphic file with name gkp993i1.jpg

Schematic diagrams for plasmid cohesion established by the embrace, bracelet and hand-cuff models from an equal mixture of cohesin(Mcd1-HA6) (cleavable by TEV protease) and cohesin(Mcd1-Myc13) (resistant to TEV protease) are shown in Figure 3 (top). Treatment with TEV protease will cleave all cohesin(Mcd1-HA6) containing rings (see drawings above), opening gates for trapped plasmids to escape. Only those plasmid molecules surrounded by the closed cohesin(Mcd1-Myc13) ring(s) will be stopped. Rp is the predicted molar ratio of plasmid that can be pulled down by the Myc-antibody before and after TEV protease cleavage; Rob is the observed value. Agreement between experiment (Figure 3B and C) and prediction is indicated by the green rectangles; disagreement by red ones. The embrace model is the winner (with two green rectangles) over the hand-cuff and bracelet models (each with a red rectangle). These assays do not permit a clean distinction between the embrace and the topological hand-cuff models.