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. Author manuscript; available in PMC: 2010 Jan 26.
Published in final edited form as: IEEE/ACM Trans Comput Biol Bioinform. 2006 Jan–Mar;3(1):33–46. doi: 10.1109/TCBB.2006.13

TABLE 9.

Results for Double Helix Initiator Element

First Residue Sequence Conventional Definition Binning Structure 4D VQ 7D VQ

116 GAGA Double Helix taaa taaa taaa
398 UCCC Double Helix taaa taaa taaa
636 GCCA Double Helix taaa taaa taaa
762 CCCG Double Helix taaa taaa taaa
826 UAGA Double Helix taaa taaa taaa
895 ACAG Double Helix taan taaa taae
961 ACCG taaa taaa taaa
1089 GAUA Double Helix taaa taaa taaa
1138 GUCU Double Helix taaa taaa taaa
1177 AGCU paaa taaa taaa
1703 GGCG Double Helix taaa taaa taaa
1986 GCCG Double Helix taaa taaa taaa
2023 GAGC Double Helix taaa taaa taaa
2059 UACA taaa taaa taaa
2084 CACC Double Helix taaa taaa taaa
2284 GGGC taaa taaa taaa
2444 UUGA Double Helix taaa taaa taaa
2566 AGAA taaa taaa taaa
2738 GAGA Double Helix taaa taaa taaa
2750 GCCG Double Helix paaa taaa taaa
2840 AAGA paaa taaa taaa