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. Author manuscript; available in PMC: 2011 Mar 1.
Published in final edited form as: Proteins. 2010 Mar;78(4):985–1003. doi: 10.1002/prot.22622

Figure 13.

Figure 13

Time evolution of folds. A kinetic equation was solved using the kinetic matrix Tij created in this work that represent the probability of flipping from fold i to fold j in unit time. A unit time corresponds to one million acceptable mutations. We only show proteins that by the end of the simulation have more than 5 percent of total probability. For THOM2 (left panel) we kept the proteins: 1TQW:A (circle) 1K32:A (triangle) 1N35:A (plus) 3BTA:A (cross). For BT (center panel) 1WX1:A (circle) 1R6V:A (triangle) 1A9X:A (plus) 1EA0:A (cross). For TSLE (right panel) 1R6V:A (circle) 1A9X:A (triangle) 1T3T:A (plus) 1EA0:A (cross).