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. Author manuscript; available in PMC: 2011 Feb 1.
Published in final edited form as: Genet Epidemiol. 2010 Feb;34(2):171–187. doi: 10.1002/gepi.20449

Table 2.

Genes showing association evidence in the WTCCC HT and CAD samples in the stage 2 association test.

Genes Chromosome Cumulative risk haplotype frequency
Fisher exact test P-value Are all SNPs good?
Cases Controls
Hypertension
TLR4 9q32-33 0.056 0.0188 1.76×10-16 No
ZFAT1 8q23-24 0.0384 0.0116 4.92×10-13 Yes

CAD
MEF2B 19p12 0.0372 0.0095 1.04×10-15 No
EIF4H 7q11.23 0.0120 0.0005 1.15×10-11 Yes
CDKN2B 9p21 0.2832 0.2247 8.75×10-9 No
HFE2 1q21 0.0065 0.0003 8.37×10-7 Yes
ZBTB43 9q33-34 0.0274 0.0119 1.29×10-6 Yes
CDR2L 17q25.1 0.0052 0.0 1.57×10-6 No
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