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. 2009 Aug 20;34(2):146–150. doi: 10.1002/gepi.20444

Table AII.

Percentage of X chromosome SNP pairsa showing no evidence of recombination (D′ = 1), perfect LD (r2 = 1), or where useful LD is observed (r2≥0.8)

D′ = 1 r2 = 1 r2 ≥ 0.8



Inter-SNP distance (kb) OOA CEU OOA CEU OOA CEU
≤10 88 85 39 35 51 49
10–20 72 64 23 19 34 31
20–50 60 48 12 9 21 18
50–100 44 31 6 3 11 10
100–200 31 19 3 1 6 4
200–500 22 11 1 0 2 1
500–1,000 18 7 0 0 0 0
1,000–2,000 17 7 0 0 0 0
2,000–5,000 15 7 0 0 0 0
5,000–10,000 13 7 0 0 0 0

OOA, Old Order Amish (n = 60); CEU, US Utah residents from HapMap (n = 60).

a

Restricted to SNPs with minor allele frequency ≥0.05 in both samples (n = 5,516).