Table 2.
Peak ID | Position | Amplitude | Position of motif match | Difference | Absolute difference | Location | CpG island |
---|---|---|---|---|---|---|---|
1 | 60,209,266.5 | 145.6 | 60,209,299.5 | 33 | 33 | Upstream of Hs.631589 | No |
2 | 60,209,352.0 | 242.4 | 60,209,319.5 | -32.5 | 32.5 | Upstream of Hs.631589 | No |
3 | 60,209,441.8 | 32.1 | 60,209,417.5 | -24.3 | 24.3 | In Hs.631589 | No |
4 | 60,355,290.1 | 93.1 | 60,355,272.5 | -17.6 | 17.6 | In TNNI3 | No |
5 | 60,355,384.7 | 109.8 | 60,355,373.5 | -11.2 | 11.2 | In TNNI3 | No |
6 | 60,483,301.5 | 116.7 | 60,483,320.5 | 19 | 19 | Upstream of HSPBP1 | Yes |
7 | 60,508,823.3 | 53.5 | 60,508,860.5 | 37.2 | 37.2 | In BRSK1 | No |
8 | 60,589,079.4 | 89.0 | 60,589,061.5 | -17.9 | 17.9 | In LOC388564, Upstream of RPL28 | Yes |
9 | 60,784,129.0 | 152.4 | 60,784,167.5 | 38.5 | 38.5 | Upstream of ZNF579 | Yes |
10 | 60,802,703.2 | 72.5 | 60,802,723.5 | 20.3 | 20.3 | In FIZ1 | Yes |
11 | 60,802,828.5 | 34.2 | Upstream of FIZ1 | Yes | |||
12 | 60,808,717.3 | 19.1 | 60,808,762.5 | 45.2 | 45.2 | Downstream of ZNF524 | Yes |
13 | 60,838,116.9 | 163.1 | Upstream of ZNF580 | Yes | |||
14 | 60,838,170.7 | 87.4 | 60,838,194.5 | 23.8 | 23.8 | Upstream of ZNF580 | Yes |
15 | 60,846,738.1 | 37.1 | Upstream of ZNF581 | Yes | |||
16 | 60,856,978.7 | 23.4 | Upstream of U2AF2 | Yes | |||
17 | 60,878,268.6 | 125.4 | 60,878,250.5 | -18.1 | 18.1 | Upstream EPN1 | Yes |
18 | 60,878,368.7 | 105.4 | 60,878,386.5 | 17.8 | 17.8 | Upstream of EPN1 | Yes |
19 | 61,517,917.1 | 24.8 | Upstream of LOC729994 | Yes | |||
20 | 61,518,034.1 | 98.8 | 61,518,049.5 | 15.4 | 15.4 | Upstream of LOC729994 | Yes |
21 | 61,518,366.6 | 26.5 | 61,518,358.5 | -8.1 | 8.1 | Upstream of LOC729994 | Yes |
22 | 61,741,681.4 | 16.8 | 61,741,681.5 | 0.1 | 0.1 | In ZFP28 | Yes |
23 | 61,741,850.8 | 25.5 | 61,741,894.5 | 43.7 | 43.7 | In ZFP28 | Yes |
CSDeconv identifies a total of 23 binding sites between position 60,000,000 and 62,000,000 on chromosome 19. The position of the sequence matching the motif shown in Figure 3a is given if such a sequence exists within 50 bp of the predicted binding site.