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. 2009 Dec 18;192(4):1045–1057. doi: 10.1128/JB.01379-09

TABLE 1.

General features of “Ca. A. asiaticus” genome and those of other members of the Bacteroidetes

Characteristic Description or value for strain
Ca. A. asiaticus” 5a2 Ca. Sulcia muelleri” GWSS Azobacteroides pseudotrichonymphae” CFP2 Flavobacterium psychrophilum JIP02/86 Bacteroides thetaiotaomicron VPI-5482
Lifestyle Obligate intracellular, parasitic Obligate intracellular, mutualistic Obligate intracellular, mutualistic Facultative intracellular, parasitic Extracellular, mutualistic or parasitic
Chromosome size (bp; excluding plasmids) 1,884,364 245,530 1,114,206 2,861,988 6,260,361
G+C content (%) 35.0 22.4 33.0 32.5 42.8
No. of protein-coding genes 1557 228 758 2432 4779
Avg length of protein-coding genes (bp) 990 1006 1047 1003 1170
No. of rRNA operons 1a 1 1a 6 5
No. of tRNA genes 35 31 38 49 71
Coding density (%) 81.8 96.1 71.2 84.5 89.3
No. of putative pseudogenes 222 - 22 20 -
No. of mobile genetic elements 381 - NDb 74 67
% of mobile genetic elements 24% - ND 3% 1%
Reference(s) This study 74, 127 45 27 129
a

16S and 23S/5S rRNA genes are unlinked.

b

ND, not determined.