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. 2009 Jun 28;2009:434038. doi: 10.1155/2009/434038

Table 6.

Comparison of hydrophobic interaction due to dimer formation of A and B subunits for Phdpd, Zn-Phdpd, and Zn-Pfprol.

Phdpd Zn-Phdpd Zn-Pfprol Δ(=Phdpd-Zn-Phdpd) Δ(=Phdpd-Zn-Pfprol)
ΔASAnp = (monomer* − dimer) 1396 2341 2263 −945 −867
ΔASAp = (monomer* − dimer) 914 1067 1070 −153 −156
Total buried area (Å2) 2310 3408 3333
ΔG HP (kJ/mol) 191 333 320 −142 −129

*Monomer means the summation of ASA of A- and B-subunits.

ASAnp and ASAp represent accessible surface area of nonpolar (C and S) atoms and polar (N and O) atoms, respectively.

The ASA values were calculated using software [20]. The unit of the ASA value is Å2 . ΔG HP was calculated using (1).