Table 1.
TC No. | Family name | Family abbreviation | Number of proteins in TCDB | Organismal type |
---|---|---|---|---|
2.A.3.1 | amino acid transporter family | AAT | 13 | B |
2.A.3.2 | basic amino acid/polyamine antiporter family | APA | 6 | B |
2.A.3.3 | cationic amino acid transporter family | CAT | 5 | E |
2.A.3.4 | amino acid/choline transporter family | ACT | 6 | E |
2.A.3.5 | ethanolamine transporter family | EAT | 2 | A, B |
2.A.3.6 | archaeal/bacterial transporter family | ABT | 1 | A, B |
2.A.3.7 | glutamate: GABA antiporter family | GGA | 1 | B |
2.A.3.8 | L-type amino acid transporter family | LAT | 15 | B, E |
2.A.3.9 | spore germination protein family | SGP | 3 | B |
2.A.3.10 | yeast amino acid transporter family | YAT | 20 | E |
2.A.3.11 | aspartate/glutamate transporter family | AGT | 1 | A, B |
2.A.3.12 | polyamine: H+ symporter family | PHS | 1 | E |
2.A.3.13 | amino acid efflux family | AAE | 1 | B |
2.A.18 | amino acid/auxin permease family | AAAP | 26 | E |
2.A.25 | alanine or glycine:cation symporter family | AGCS | 3 | A, B |
2.A.30 | cation-chloride cotransporter family | CCC | 10 | E |
2.A.42 | hydroxy/aromatic amino acid permease family | HAAAP | 6 | B |
APC = Amino acid/polyamine/organocation.
Family transporter classification (TC) number for the 17 current members of the APC superfamily. In the current study, only the AGCS (TC 2.A.25) family was not included, as it was not known to be a member of the APC superfamily when these studies were initiated. The last four entries are established TC families that were later shown to be members of the APC superfamily.
Their superfamily status is indicated in TCDB by a hyperlink. The original family TC numbers were retained because of the stipulation by the International Union of Biochemistry and Molecular Biology (IUBMB) that the TC system must be a static system of classification.
Organismal type from which the proteins derive: B = bacteria; A = archaea; E = eukaryotes.