Table 1. Characteristics of far-red fluorescent proteins.
Protein | Excitation peaka | Emission peaka | εb | φc | Brightness excited at peakd | Brightness excited at 633nme | Photostabilityf | pKa |
---|---|---|---|---|---|---|---|---|
dTomatog | 554 | 581 | 69000 | 0.69 | 48 | 0 | 64 | 4.7 |
mCherryg | 587 | 610 | 72000 | 0.22 | 16 | 0.084 | 68 | <4.5 |
mPlumg | 590 | 649 | 41000 | 0.10 | 4.1 | 0.26 | 53 | <4.5 |
mRaspberryg | 598 | 625 | 86000 | 0.15 | 13 | 0.45 | 15 | <4.5 |
mGrape3 | 608 | 646 | 40000h | 0.03 | 1.2 | 0.29 | 5 | 7.0 |
mKate | 585 | 635 | 42000 | 0.30 | 13 | 0.43 | 82 | 6.2i |
mKate S158A | 585 | 630 | 75000 | 0.30 | 23 | 0.48 | 327 | 5.4i |
mKate2 | 586 | 630 | 50000 | 0.36 | 18 | 0.42 | ND | 5.4i |
mKate S158C | 586 | 630 | 63000 | 0.33 | 21 | 0.56 | 220j | ND |
mKate M41G S158C | 593 | 648 | 73000 | 0.22 | 16 | 1.2 | ND | ND |
Neptune (mKate M41G S61C S158C Y197F) | 600 | 650 | 72000 | 0.18 | 13 | 1.7 | 185 | 5.8 |
mNeptune (Neptune M146T) | 600 | 650 | 67000 | 0.20 | 13 | 1.8 | 160 | 5.4 |
Excitation and emission maxima in nm.
Maximum extinction coefficient per chain in M-1cm-1 measured by the alkali denaturation method (Chalfie and Kain, 2005; Gross et al., 2000).
Quantum yield of fluorescence.
Calculated as (peak extinction coefficient per chain • quantum yield)/(1000 M-1cm-1).
Calculated as (extinction coefficient per chain at 633 nm • quantum yield • emission fraction above 633 nm)/(1000 M-1cm-1).
Time in s to photobleach 50% from an initial rate of 1000 emitted photons s-1 molecule-1.
Published values for dTomato, mCherry, and mPlum (Shaner et al., 2005).
After photoactivation by 470nm light.
Published values (Pletnev et al., 2008).
Monoexponential decay.