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. Author manuscript; available in PMC: 2011 Feb 19.
Published in final edited form as: J Mol Biol. 2009 Nov 18;396(2):252. doi: 10.1016/j.jmb.2009.11.034

Figure 4.

Figure 4

Inter-subunit contact architecture of Oda and Holmes actin filaments derived from MD simulations. The average Cα position is depicted as a tube model to illustrate the cross-strand (ii+1) and intra-strand (ii+2) contacts. The initial structure is compared to the ATP/unfold and ADP/fold simulations. Contacts are shown in blue (subunit i) or black (subunits i+1 and i+2), and a contact is defined as two Cα atoms being less than 10 Å apart. Table S2 details the specific residues in contact for all of the models investigated.